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Gen3 Monthly Release 2023.02 BDCat Preprod preprod.gen3.biodatacatalyst.nhlbi.nih.gov - 2023.02 1674838788 #5620

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merged 4 commits into from
Jan 30, 2023
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Gen3 Monthly Release 2023.02 BDCat Preprod preprod.gen3.biodatacatalyst.nhlbi.nih.gov - 2023.02 1674838788 #5620

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0e366dc
apply version 2023.02 to preprod.gen3.biodatacatalyst.nhlbi.nih.gov
PlanXCyborg Jan 27, 2023
7546e2b
apply version 2023.02 to preprod.gen3.biodatacatalyst.nhlbi.nih.gov
PlanXCyborg Jan 27, 2023
f10b70c
Use data-portal 5.3.0
SpencerAxelrod Jan 27, 2023
c8875bd
Update config to Accessible and Not Accessible
SpencerAxelrod Jan 27, 2023
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58 changes: 29 additions & 29 deletions preprod.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json
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Original file line number Diff line number Diff line change
Expand Up @@ -7,30 +7,30 @@
"autodeploy": "yes"
},
"versions": {
"access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2022.11",
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2022.11",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2022.11",
"awshelper": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/awshelper:2022.11",
"access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2023.02",
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2023.02",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2023.02",
"awshelper": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/awshelper:2023.02",
"aws-es-proxy": "quay.io/cdis/aws-es-proxy:0.8",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2022.11",
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2022.11",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2022.11",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2022.11",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2022.11",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2022.11",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2.1.0",
"portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2022.11",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2023.02",
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2023.02",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2023.02",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2023.02",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2023.02",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2023.02",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2023.02",
"portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:5.3.0",
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I noticed this tag isn’t a YYYY.MM format - I take it that the data-portal fix we need isn’t in the 2023.02 tag?

"fluentd": "fluent/fluentd-kubernetes-daemonset:v1.2-debian-cloudwatch",
"spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2022.11",
"tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2022.11",
"guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2022.11",
"sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2022.11",
"hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2022.11",
"spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2023.02",
"tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2023.02",
"guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2023.02",
"sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2023.02",
"hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2023.02",
"ambassador": "quay.io/datawire/ambassador:1.4.2",
"wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2022.11",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2022.11",
"ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2022.11",
"dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2022.11"
"wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2023.02",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2023.02",
"ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2023.02",
"dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2023.02"
},
"google": {
"enabled": "yes"
Expand All @@ -40,7 +40,7 @@
},
"ssjdispatcher": {
"job_images": {
"indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2022.11"
"indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2023.02"
}
},
"arborist": {
Expand All @@ -52,7 +52,7 @@
"action": "export",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -116,7 +116,7 @@
"action": "export-files",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -186,7 +186,7 @@
"serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-manifest-ingestion:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-manifest-ingestion:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -226,7 +226,7 @@
"serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/get-dbgap-metadata:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/get-dbgap-metadata:2023.02",
"pull_policy": "Always",
"env": [],
"volumeMounts": [
Expand Down Expand Up @@ -257,7 +257,7 @@
"serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifest-indexing:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifest-indexing:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -298,7 +298,7 @@
"serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/cdis/manifest-merging:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/cdis/manifest-merging:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -339,7 +339,7 @@
"serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/download-indexd-manifest:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/download-indexd-manifest:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down
2 changes: 1 addition & 1 deletion preprod.gen3.biodatacatalyst.nhlbi.nih.gov/manifests/hatchery/hatchery.json
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Expand Up @@ -5,7 +5,7 @@
"sidecar": {
"cpu-limit": "1.0",
"memory-limit": "256Mi",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2023.02",
"env": {
"NAMESPACE": "internalstaging",
"HOSTNAME": "internalstaging.datastage.io"
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10 changes: 1 addition & 9 deletions preprod.gen3.biodatacatalyst.nhlbi.nih.gov/portal/gitops.json
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Expand Up @@ -663,19 +663,11 @@
"supportedValues": {
"accessible": {
"enabled": true,
"menuText": "Available"
"menuText": "Accessible"
},
"unaccessible": {
"enabled": true,
"menuText": "Not Accessible"
},
"pending": {
"enabled": true,
"menuText": "Pending"
},
"notAvailable": {
"enabled": true,
"menuText": "Not Available"
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Might be missing something but I don't see any indication of PXP-10660 getting solved with this PR. Can we link that JIRA issue with this PR?

}
}
}
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