feat(jobs): fence db create job

gen3/bin/reset.sh

@@ -32,14 +32,14 @@ run_setup_jobs() {
   # sheepdog wants its transaction tables to exist at startup
   # jobs run asynchronously ...
   #
-  for jobName in gdcdb-create indexd-userdb; do
+  for jobName in gdcdb-create indexd-userdb fence-db-migrate; do
     echo "Launching job $jobName"
     gen3 job run $jobName
   done
   echo "Waiting for jobs to finish, and late starting services to come up"
   sleep 5
   gen3 kube-wait4-pods
-  for jobName in gdcdb-create indexd-userdb; do
+  for jobName in gdcdb-create indexd-userdb fence-db-migrate; do
     echo "--------------------"
     echo "Logs for $jobName"
     gen3 job logs "$jobName"

kube/services/jobs/fence-db-migrate-job.yaml

@@ -0,0 +1,57 @@
+---
+apiVersion: batch/v1
+kind: Job
+metadata:
+  name: fence-db-migrate
+spec:
+  template:
+    metadata:
+      labels:
+        app: gen3job
+    spec:
+      serviceAccountName: useryaml-job
+      volumes:
+        - name: config-volume
+          secret:
+            secretName: "fence-config"
+        - name: fence-google-app-creds-secret-volume
+          secret:
+            secretName: "fence-google-app-creds-secret"
+        - name: fence-google-storage-creds-secret-volume
+          secret:
+            secretName: "fence-google-storage-creds-secret"
+        - name: fence-yaml
+          configMap:
+            name: fence
+      containers:
+      - name: fence
+        GEN3_FENCE_IMAGE
+        imagePullPolicy: Always
+        env:
+          - name: PYTHONPATH
+            value: /var/www/fence
+        volumeMounts:
+          - name: "config-volume"
+            readOnly: true
+            mountPath: "/var/www/fence/fence-config.yaml"
+            subPath: fence-config.yaml
+          - name: "fence-google-app-creds-secret-volume"
+            readOnly: true
+            mountPath: "/var/www/fence/fence_google_app_creds_secret.json"
+            subPath: fence_google_app_creds_secret.json
+          - name: "fence-google-storage-creds-secret-volume"
+            readOnly: true
+            mountPath: "/var/www/fence/fence_google_storage_creds_secret.json"
+            subPath: fence_google_storage_creds_secret.json
+          - name: "fence-yaml"
+            mountPath: "/var/www/fence/user.yaml"
+            subPath: user.yaml
+        command: ["/bin/bash"]
+        args:
+          - "-c"
+          - |
+            fence-create migrate
+            if [[ $? != 0 ]]; then
+              echo "WARNING: non zero exit code: $?"
+            fi
+      restartPolicy: Never