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MSTmap-Python

The Python library for the C++ software https://github.com/ucrbioinfo/MSTmap presented in https://doi.org/10.1371/journal.pgen.1000212

Find the documentation here https://github.com/AmirUCR/MSTmap-Python/wiki and the web server here https://mstmap.org/.

Install the package here via pip install mstmap, also here https://pypi.org/project/mstmap/. Supported on Ubuntu Linux and Python >= 3.7

Wu, Yonghui, et al. "Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graph." PLoS genetics 4.10 (2008): e1000212.

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A Python wrapper for UCRBioInfo MSTmap

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  • C++ 93.4%
  • Cython 5.9%
  • Python 0.7%