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[FEATURE] Treating Data-Sets Without Batches #22

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Livia-Rasp opened this issue Apr 26, 2019 · 0 comments
Open

[FEATURE] Treating Data-Sets Without Batches #22

Livia-Rasp opened this issue Apr 26, 2019 · 0 comments

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@Livia-Rasp
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Is your feature request related to a problem? Please describe.
Even though BEclear is in first line for detecting and correcting batch effects, it could be sensible to provide some possibility to ork with data, where there are no batches defined

Describe the solution you'd like
Just test each sample against all other samples, i.e. treat each sample as a batch.

Describe alternatives you've considered
Define batches de novo by e.g. clustering the samples.
@Livia-Rasp Livia-Rasp changed the title [FEATURE] Treating data-sets without batches [FEATURE] Treating Data-Sets Without Batches Apr 26, 2019
Livia-Rasp added a commit that referenced this issue May 9, 2019
@Livia-Rasp
added example regarding issue #22
5f44ba5
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@Livia-Rasp