Update CICE cap for optional features; use UPP as submodule (was #904)

[DeniseWorthen]

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Description

• Updates CICE cap for optional features
• Uses UPP as a FV3atm submodule (@DusanJovic-NOAA)
• remove CA namelist settings from HAFS related input.nml files
• removes control_ca_restart test (unused). CA restart is now tested in the cpld and control P7 test suites.
• adds 35d RT test (cpld_bmark_p7_35d) which can be used with rt_35d.conf (@MinsukJi-NOAA)

Issue(s) addressed

• fixes Update NUOPC cap for new features NOAA-EMC/CICE#41
• fixes Use UPP as a submodule #905

Testing

The full RT for both Intel and GNU was run on Hera. All baselines were B4B.

During RT testing, new versions of g2tmpl were used on dell and gaea. Baselines changed for the following tests due to the comparison of the GrbF00 and GrbF24 files

regional_quilt 034 failed in check_result
regional_quilt_2threads 035 failed in check_result
regional_quilt_RRTMGP 038 failed in check_result

• hera.intel
• hera.gnu
• orion.intel
• cheyenne.intel
• cheyenne.gnu
• gaea.intel
• jet.intel
• wcoss_cray
• wcoss_dell_p3
• opnReqTest for newly added/changed feature
• CI: https://github.com/ufs-community/ufs-weather-model/actions/runs/1481651452

Dependencies

• waiting on Update CICE cap for optional features NOAA-EMC/CICE#42
• waiting on Use upp as a submodule NOAA-EMC/fv3atm#421

[dusanjovic]

I tried to set g2tmpl module load to a version that does not exist (g2tmpl/99.0.0), and module load still works. I think that's because, for example, on Gaea:

$ grep load /lustre/f2/pdata/ncep_shared/hpc-stack/modulefiles/mpi/intel/18.0.6.288/cray-mpich/7.7.11/upp/10.0.10.lua
load("bacio", "g2", "g2tmpl", "ip", "sp", "w3nco", "w3emc", "crtm")

I think modules should just list:

$ grep prereq /lustre/f2/pdata/ncep_shared/hpc-stack/modulefiles/mpi/intel/18.0.6.288/cray-mpich/7.7.11/upp/10.0.10.lua
prereq("bacio", "g2", "g2tmpl", "ip", "sp", "w3nco", "w3emc", "crtm")

and not load other modules, especially not without explicit version.

[DusanJovic-NOAA]

WCOSS (Cray and Dell) logs are here:
/scratch1/NCEPDEV/stmp2/Dusan.Jovic/pr910/RegressionTests_wcoss_cray.log
/scratch1/NCEPDEV/stmp2/Dusan.Jovic/pr910/RegressionTests_wcoss_dell_p3.log