fix: don't use anaconda defaults channel

[tedil]

Summary by CodeRabbit

• New Features

  • Introduced a new channel configuration (nodefaults) across various environment files to enhance package management by excluding default channels.
  • Updated dependencies in the datastuff.yaml file to include specific versions of Python, Polars, and Pandas, improving compatibility and performance.

• Bug Fixes

  • Adjusted formatting in checksum.yaml to ensure proper file structure.

• Chores

  • Commented out unnecessary dependencies in datastuff.yaml to streamline the environment setup.

[coderabbitai]

Walkthrough

The changes involve modifications to several YAML files within the workflow/envs directory, primarily focusing on the channel configuration for package management. The defaults channel has been replaced with nodefaults across all files, indicating that the default channel will not be utilized in package resolution. Additionally, some files have seen updates to their dependencies, including the addition of specific versions for Python and other libraries, while others have retained their dependency versions or commented out unnecessary packages.

Changes

File Path	Change Summary
workflow/envs/base.yaml	Channel modified: defaults → nodefaults
workflow/envs/checksum.yaml	Channel modified: defaults → nodefaults; Dependency remains unchanged: sha256 ==1.0
workflow/envs/datastuff.yaml	Channel modified: defaults → nodefaults; Dependencies added: python =3.12, polars =0.20, pandas =2.2.2; Dependencies commented out: hvplot, pyarrow
workflow/envs/efetch.yaml	Channel modified: defaults → nodefaults
workflow/envs/jq.yaml	Channel modified: defaults → nodefaults
workflow/envs/mehari.yaml	Channel added: nodefaults
workflow/envs/samtools.yaml	Channel modified: defaults → nodefaults
workflow/envs/seqrepo.yaml	Channel modified: defaults → nodefaults

Sequence Diagram(s)

sequenceDiagram
    participant User
    participant PackageManager
    participant Channel

    User->>PackageManager: Request package installation
    PackageManager->>Channel: Check available packages
    Channel-->>PackageManager: Provide packages (excluding defaults)
    PackageManager-->>User: Install packages

Loading

🐇 "In the land of YAML, changes abound,
With channels adjusted, new paths are found.
No more defaults, we hop with glee,
Dependencies tailored, as fine as can be!
Let's celebrate this workflow delight,
With packages ready, our futures are bright!" 🐇

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