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v1.2.0-beta

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@voutcn voutcn released this 25 Mar 06:18
· 138 commits to master since this release
b616e1f

Heavily refactored the whole project:

  • Remove GPU support
  • Use cmake
  • Use sparsepp to replace IDBA's hash map for better performance in both speed and memory efficiency
  • Use pdep instruction to speed up rank and select
  • Rewrite unitig graph
  • Rewrite the iterate-edge component
  • Rewrite the SDBG library, except for the builder
  • Fixed a bug which may involve too many reads into local assembly

The changes result in a faster and more memory-efficient tool, but have little effect on assembly quality.