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Strainberry #109

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10 tasks done
lexming opened this issue Mar 13, 2023 · 1 comment
Closed
10 tasks done

Strainberry #109

lexming opened this issue Mar 13, 2023 · 1 comment
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difficulty: easy software that should be easy to support priority: low Python site:vub Software installation request for VUB Tier-2

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@lexming
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lexming commented Mar 13, 2023 •
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  • link to support ticket: INC0138618 (VUB)
  • website: https://github.com/rvicedomini/strainberry
  • installation docs:
  • toolchain: foss/2022a
  • easyblock to use: Tarball
  • required dependencies:
    • Biopython
    • Longshot
    • minimap2
    • MUMmer
    • networkx
    • pygraphviz
    • Pysam
    • PyVCF
    • SAMtools
    • wtdbg2
  • notes:
    • ...
  • effort: low
@lexming lexming added difficulty: easy software that should be easy to support priority: low Python site:vub Software installation request for VUB Tier-2 labels Mar 13, 2023
@lexming
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lexming commented Mar 13, 2023

PRs:

@lexming lexming closed this as completed Mar 14, 2023
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