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Disambiguate "running" for transactions
The phrase "a transaction is running" was not normatively defined and confusing given the complex lifecycle of transactions. Introduce a new definition for "live" which covers from a transactions creation until it is finished. Also, rename "running an upgrade transaction" since steps are often invoked with "run" and that could get awkward. Simplify to "upgrade a database". No behavior changes, just normative terminology definitions. Resolves #408. Thanks to @evanstade the issue and suggestions.
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