Merge pull request #60 from alvanuffelen/log_fix

- Put first logging instance after basicConfig call
wdecoster · Sep 6, 2022 · 5a8a3ee · 5a8a3ee
2 parents 76147c1 + 19712b7
commit 5a8a3ee
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diff --git a/nanofilt/NanoFilt.py b/nanofilt/NanoFilt.py
@@ -28,11 +28,13 @@
 import nanofilt.utils as utils
 import logging
 from math import log
+from nanofilt.version import __version__
 
 
 def main():
     args = utils.get_args()
     utils.start_logging(args.logfile)
+    logging.info('NanoFilt {} started with arguments {}'.format(__version__, args))
     try:
         if args.tailcrop:
             args.tailcrop = -args.tailcrop

diff --git a/nanofilt/utils.py b/nanofilt/utils.py
@@ -84,7 +84,6 @@ def get_args():
         args.GC_filter = False
     else:
         args.GC_filter = True
-    logging.info('NanoFilt {} started with arguments {}'.format(__version__, args))
     return args