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1. awesome-graph-transformer awesome-graph-transformer Public

   Papers about graph transformers.

   818 71

2. CellT CellT Public

   An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"

   Python 16 2

3. scmognn scmognn Public

   Official repo for paper Graph Neural Networks for Multimodal Single-Cell Data Integration

   Python 6 1

4. OmicsML/dance OmicsML/dance Public

   DANCE: a deep learning library and benchmark platform for single-cell analysis

   Python 353 36

5. OmicsML/awesome-deep-learning-single-cell-papers OmicsML/awesome-deep-learning-single-cell-papers Public

   710 92

6. OmicsML/CellPLM OmicsML/CellPLM Public

   Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.

   Jupyter Notebook 75 6