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1. HKU-BAL/Clair3 HKU-BAL/Clair3 Public

   Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

   Python 247 27

2. HKU-BAL/ClairS HKU-BAL/ClairS Public

   ClairS - a deep-learning method for long-read somatic small variant calling

   Python 74 7

3. HKU-BAL/Clair3-RNA HKU-BAL/Clair3-RNA Public

   Clair3-RNA - a long-read small variant caller for RNA sequencing data

   Python 14 1

4. Repun Repun Public

   An accurate small variant representation unification method for multiple sequencing platforms

   Python 2 1

5. HKU-BAL/ClairS-TO HKU-BAL/ClairS-TO Public

   ClairS-TO - a deep-learning method for tumor-only somatic variant calling

   Python 50 3

6. HKU-BAL/Clair HKU-BAL/Clair Public

   Clair: Exploring the limit of using deep neural network on pileup data for germline variant calling

   Python 104 12