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@BV-BRC

Bacterial and Viral Bioinformatics Resource Center

Software repository for the Bacterial and Viral Bioinformatics Resource Center (BV-BRC) project.

The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is an information system designed to support the biomedical research community’s work on bacterial and viral infectious diseases via integration of vital pathogen information with rich data and analysis tools. BV-BRC combines the data, technology, and extensive user communities from two long-running centers: PATRIC, the bacterial system , and IRD/ViPR, the viral systems. In addition to hundreds of thousands of bacterial genomes in PATRIC and over a million viral genomes in IRD/ViPR, the two resources host data on protein structure and function, clinical studies, drug targets and resistance, epidemiology, and other features, and provide open source tools for data analysis and genomic annotation.

Learn more about BV-BRC.

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  1. BV-BRC-Web BV-BRC-Web Public

    The BV-BRC Web Application

    JavaScript 7 21

  2. BV-BRC-Docs BV-BRC-Docs Public

    The BV-BRC Documentation

    Python 3 10

  3. BV-BRC-CLI BV-BRC-CLI Public

    The BV-BRC Command Line Interface

    8 1

  4. BV-BRC-API BV-BRC-API Public

    This repository contains source code for BV-BRC Data API service

    CSS 4 12

Repositories

Showing 10 of 85 repositories
  • BV-BRC-Web Public

    The BV-BRC Web Application

    BV-BRC/BV-BRC-Web’s past year of commit activity
    JavaScript 7 MIT 21 0 6 Updated Sep 19, 2024
  • chris-test-repo Public

    test repo

    BV-BRC/chris-test-repo’s past year of commit activity
    0 0 0 0 Updated Sep 15, 2024
  • BV-BRC/BV-BRC-HostAnnotation’s past year of commit activity
    C# 0 1 0 0 Updated Sep 12, 2024
  • BV-BRC/bvbrc_subspecies_classification’s past year of commit activity
    Perl 1 3 0 0 Updated Sep 11, 2024
  • BV-BRC-Docs Public

    The BV-BRC Documentation

    BV-BRC/BV-BRC-Docs’s past year of commit activity
    Python 3 10 0 0 Updated Sep 4, 2024
  • BV-BRC/p3_assembly’s past year of commit activity
    Python 0 MIT 4 0 0 Updated Aug 29, 2024
  • p3_binning Public

    PATRIC Metagenome Binning Application

    BV-BRC/p3_binning’s past year of commit activity
    Perl 0 2 0 0 Updated Aug 29, 2024
  • bvbrc_ha_subtype_conversion Public

    HA Subtype Numbering Conversion to renumber HA sequences according to a cross-subtype numbering scheme proposed by Burke and Smith.

    BV-BRC/bvbrc_ha_subtype_conversion’s past year of commit activity
    Python 0 4 0 0 Updated Aug 29, 2024
  • bvbrc_variation Public

    BV-BRC variation computation service

    BV-BRC/bvbrc_variation’s past year of commit activity
    Perl 0 3 0 0 Updated Aug 29, 2024
  • p3_mauve Public
    BV-BRC/p3_mauve’s past year of commit activity
    JavaScript 0 MIT 5 0 2 Updated Aug 29, 2024

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