{
  "language": "perl",
  "os": [
    "linux"
  ],
  "dist": "focal",
  "sudo": false,
  "cache": {
    "apt": false,
    "directories": [
      "$HOME/perl5/perlbrew",
      "$HOME/dependencies"
    ]
  },
  "perl": [
    "5.26",
    "5.32"
  ],
  "env": [
    "jobs={:COVERALLS=>\"true\", :DB=>\"mysql\", :COVERALLS_REPO_TOKEN=>\"${{secret.COVERALLS_REPO_TOKEN}}\"}={:COVERALLS=>\"false\", :DB=>\"mysql\"}={:COVERALLS=>\"false\", :DB=>\"sqlite\"}"
  ],
  "addons": {
    "apt": {
      "packages": [
        "apache2",
        "libbz2-dev",
        "libcurl4-gnutls-dev",
        "libexpat1-dev",
        "liblzma-dev",
        "libmysqlclient-dev",
        "libpng-dev",
        "libssl-dev",
        "openssl"
      ]
    }
  },
  "services": [
    "mysql"
  ],
  "before_install": [
    "git clone --depth 1 https://github.com/Ensembl/ensembl-git-tools.git",
    "export PATH=$PWD/ensembl-git-tools/bin:$PATH",
    "export ENSEMBL_BRANCH='main'",
    "export ENSEMBL_VER=$(echo $TRAVIS_BRANCH | grep -P -o '(?<=version[\\W_]|fix[\\W_]|release[\\W_])(\\d+)')",
    "if [[ $ENSEMBL_VER =~ [0-9]+ ]]; then ENSEMBL_BRANCH=\"release/$ENSEMBL_VER\"; fi",
    "git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-test.git",
    "git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl.git",
    "git-ensembl --clone --branch $ENSEMBL_BRANCH --secondary_branch main --depth 1 ensembl-variation",
    "export CWD=$PWD",
    "export DEPS=$HOME/dependencies",
    "mkdir -p $DEPS",
    "cd $DEPS",
    "$CWD/travisci/get_dependencies.sh",
    "cd $CWD"
  ],
  "install": [
    "export CWD=$PWD",
    "export DEPS=$HOME/dependencies",
    "export KENT_SRC=\"$DEPS/kent-335_base/src\"",
    "export HTSLIB_DIR=$DEPS/htslib",
    "export MACHTYPE=$(uname -m)",
    "export CFLAGS=\"-fPIC\"",
    "export PERL5LIB=$DEPS/bioperl-live:$PERL5LIB",
    "cd $DEPS",
    "$CWD/travisci/build_c.sh",
    "cd $CWD",
    "cpanm -v --sudo --installdeps --with-all-features --notest --cpanfile ensembl/cpanfile .",
    "cpanm -v --sudo --installdeps .",
    "mysql -u root -h localhost -e 'GRANT ALL PRIVILEGES ON *.* TO \"travis\"@\"%\"'",
    "mysql -u root -h localhost -e 'SET GLOBAL local_infile=1'",
    "cp travisci/MultiTestDB.conf.travisci.mysql  modules/t/MultiTestDB.conf.mysql",
    "cp travisci/MultiTestDB.conf.travisci.SQLite modules/t/MultiTestDB.conf.SQLite"
  ],
  "script": [
    "./travisci/harness.sh"
  ],
  "jobs": {
    "exclude": [
      {
        "perl": "5.32",
        "env": [
          {
            "COVERALLS": "true",
            "DB": "mysql",
            "COVERALLS_REPO_TOKEN": "${{secret.COVERALLS_REPO_TOKEN}}"
          }
        ]
      },
      {
        "perl": "5.26",
        "env": [
          {
            "COVERALLS": "false",
            "DB": "mysql"
          }
        ]
      }
    ]
  },
  "notifications": {
    "slack": [
      {
        "rooms": [
          {
            "secure": "bNSqBwR+6GpKqW22MuBbdAH9Pb25hbX8UOW3MVd9HI7CnQBOfifXR47AMClFgfV5ZcHHRnOtOqin8RYccmrTJOxAAa6IilFJ/z5XAjVIMLQAORut+fVYnwOmQuvedWR8GdXq/awgVLeNG/ROIwl1gyFirTWYV5ygwM4McvD8y5A="
          }
        ],
        "on_failure": "change"
      }
    ]
  }
}