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Composite bodies/abutting meshes #27

Merged
merged 6 commits into from
Apr 25, 2024
Merged

Composite bodies/abutting meshes #27

merged 6 commits into from
Apr 25, 2024

Commits on Apr 21, 2024

  1. Adaptive hole map (Exawind#14) 

    * Fixing header of meshblock output of tecplot files.

* Fix cmakelists for driver and gridgen mpi and tioga library linking.

* WIP: check in the adaptive hole map source code.

* Implemented adaptive hole map and initial tests for tioga test sphere case with multiblock looks coorrect. Need to extensively test.

* (1) Add duplicate node check when an element has two adjoining faces with an outer/overset bc face and wall bc face -- this prevents the adaptive hole map from refining to the max number of levels. (2) Fix compiler warnings about the intstring character array buffer size.

* Replaced octant pointers with std::vectors. Verified correctness and memory cleanup. Note: suspect small memory leak in exchangeBoxes().

* Reenable poisson exe by fixing the fortran MPI compling issue.

* Add tioga interface function to set hole map algorithm (instead of a compiler define variable). Also added memory cleanup for tioga shutdown -- checked with valgrind (iblank_cell is lost but only because it is handled by nalu-wind).

* Setting the hole map algorithm to the original for merging.

* Revome old svn files.

* (1) Fix while loop bug which didn't update the temp donorList candidate in MeshBlock::processDonors. (2) Replace raw c-pointers for adaptive processDonors.

* Address comments from Ashesh: (1) conditionals around adaptive hole map specific functions (comms), (2) macro replacement, (3) increase max level to all full 32-bit usage, (4) add back poisson_mms.

* Remove malloc.h as it's nonstandard; commented out allocated data function using mallinfo.
    @ackirby88 @itopcuoglu
    ackirby88 authored and itopcuoglu committed Apr 21, 2024
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  2. Check in of abutting mesh interface and algorithm adjustments.

    @ackirby88 @itopcuoglu
    ackirby88 authored and itopcuoglu committed Apr 21, 2024
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  3. WIP: Checking in gmsh reader for abutting mesh test case.

    @ackirby88 @itopcuoglu
    ackirby88 authored and itopcuoglu committed Apr 21, 2024
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  4. WIP: Checking in abutting mesh test case -- added tet mesh. Need to a… 

    …dd the abutting interface calls.
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    ackirby88 authored and itopcuoglu committed Apr 21, 2024
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  5. Rebased the branch abutting_meshes onto exawind

    @itopcuoglu
    itopcuoglu committed Apr 21, 2024
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  6. MPI_Finalized check before calling MPI_Comm_free for blockcomm

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    itopcuoglu committed Apr 21, 2024
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