New package: Couenne_jll v0.5.8+0 #33796

jlbuild · 2021-04-07T23:08:43Z

Autogenerated JLL package registration

Registering JLL package Couenne_jll.jl
Repository: https://github.com/JuliaBinaryWrappers/Couenne_jll.jl
Version: v0.5.8+0
Revision on Yggdrasil: JuliaPackaging/Yggdrasil@8be1982

github-actions · 2021-04-07T23:12:21Z

Your new _jll package pull request met all of the guidelines for auto-merging and is scheduled to be merged in the next round.

If you want to prevent this pull request from being auto-merged, simply leave a comment. If you want to post a comment without blocking auto-merging, you must include the text [noblock] in your comment.

giordano · 2021-04-07T23:19:10Z

@odow https://github.com/JuliaRegistries/General/pull/33796/checks?check_run_id=2292099385#step:6:191

ERROR: InitError: could not load library "/tmp/jl_lYVjlJ/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so"
libbonminampl.so.4: cannot open shared object file: No such file or directory

[noblock]

odow · 2021-04-08T01:40:41Z

I continue to display a terrible naivety with BinaryBuilder. I guess if a JLL uses a library from another JLL, that library must be declared as one of the products?

julia> using Ipopt_jll, Bonmin_jll, Libdl

julia> Libdl.dlopen(joinpath(dirname(Ipopt_jll.libipopt_path), "libipoptamplinterface.dylib"))
Ptr{Nothing} @0x00007fac8c749850

julia> Libdl.dlopen(joinpath(dirname(Bonmin_jll.libbonmin_path), "libbonminampl.dylib"))
Ptr{Nothing} @0x00007fac8c572190

julia> using Couenne_jll

julia> Couenne_jll.amplexe() do path
       run(`$(path) -v`)
       end
Couenne 0.5.8 -- an Open-Source solver for Mixed Integer Nonlinear Optimization
Mailing list: couenne@list.coin-or.org
Instructions: http://www.coin-or.org/Couenne
couenne (Linux x86_64), ASL(20210327)

Process(`/Users/oscar/.julia/artifacts/2a977e2bc37cb7d4c751b647ffe19671a1e097a8/bin/couenne -v`, ProcessExited(0))

So I guess I need to add LibraryProduct("libipoptamplinterface", :libipoptamplinterface), to
https://github.com/JuliaPackaging/Yggdrasil/blob/e93b3b95a9e8a2704fc095ce2cb788fe38a6af6d/I/Ipopt/build_tarballs.jl#L41-L44
and
LibraryProduct("libbonminampl", :libbonminampl), to
https://github.com/JuliaPackaging/Yggdrasil/blob/b19036c32fc5d00ea4cc7fc5a1b35131d44a5403/C/Coin-OR/Bonmin/build_tarballs.jl#L58-L61?

[noblock]

giordano · 2021-04-08T01:47:55Z

I guess if a JLL uses a library from another JLL, that library must be declared as one of the products?

Yes, that's correct 🙂

[noblock]

giordano · 2021-04-08T20:37:49Z

Rejoice, new error!

ERROR: InitError: could not load library "/tmp/jl_KKxJ1h/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so"
/tmp/jl_KKxJ1h/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so: undefined symbol: _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameEij

% echo _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameEij|c++filt 
virtual thunk to OsiClpSolverInterface::getRowName(int, unsigned int) const

[noblock]

giordano · 2021-04-08T20:40:25Z

Seems to be the same function that caused a failure in #31558 (comment)

[noblock]

odow · 2021-04-08T21:11:03Z

Now I'm very very confused, because Pkg claims to have pulled in Clp@1.17.6 (https://github.com/JuliaRegistries/General/pull/33796/checks?check_run_id=2300504160#step:6:100), which is the one Cbc_jll needed to fix the problem (#31977).

[noblock]

Here's what I get on a Mac after deving the package.

(couenne) pkg> st -m
      Status `/private/tmp/couenne/Manifest.toml`
  [692b3bcd] JLLWrappers v1.2.0
  [ae81ac8f] ASL_jll v0.1.2+0
  [29cba6d7] Bonmin_jll v1.8.8+2
  [38041ee0] Cbc_jll v2.10.5+2
  [3830e938] Cgl_jll v0.60.2+6
  [06985876] Clp_jll v1.17.6+7
  [be027038] CoinUtils_jll v2.11.3+4
  [f09e9e23] Couenne_jll v0.5.8+0 `~/.julia/dev/Couenne_jll`
  [9cc047cb] Ipopt_jll v3.13.4+1
  [d00139f3] METIS_jll v5.1.0+5
  [d7ed1dd3] MUMPS_seq_jll v5.2.1+4
  [656ef2d0] OpenBLAS32_jll v0.3.12+1
  [7da25872] Osi_jll v0.108.5+4
  [0dad84c5] ArgTools
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL
  [76f85450] LibGit2
  [8f399da3] Libdl
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions
  [44cfe95a] Pkg
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [fa267f1f] TOML
  [a4e569a6] Tar
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll
  [deac9b47] LibCURL_jll
  [29816b5a] LibSSH2_jll
  [c8ffd9c3] MbedTLS_jll
  [14a3606d] MozillaCACerts_jll
  [83775a58] Zlib_jll
  [8e850ede] nghttp2_jll
  [3f19e933] p7zip_jll

julia> using Couenne_jll
[ Info: Precompiling Couenne_jll [f09e9e23-9010-5c9e-b679-9f1d8f79b85c]

julia> Couenne_jll.amplexe() do path
       run(`$(path) -v`)
       end
Couenne 0.5.8 -- an Open-Source solver for Mixed Integer Nonlinear Optimization
Mailing list: couenne@list.coin-or.org
Instructions: http://www.coin-or.org/Couenne
couenne (Linux x86_64), ASL(20210327)

Process(`/Users/oscar/.julia/artifacts/2a977e2bc37cb7d4c751b647ffe19671a1e097a8/bin/couenne -v`, ProcessExited(0))

while on linux

(couenne) pkg> st -m
      Status `/tmp/couenne/Manifest.toml`
  [692b3bcd] JLLWrappers v1.2.0
  [ae81ac8f] ASL_jll v0.1.2+0
  [29cba6d7] Bonmin_jll v1.8.8+2
  [38041ee0] Cbc_jll v2.10.5+2
  [3830e938] Cgl_jll v0.60.2+6
  [06985876] Clp_jll v1.17.6+7
  [be027038] CoinUtils_jll v2.11.3+4
  [f09e9e23] Couenne_jll v0.5.8+0 `~/.julia/dev/Couenne_jll`
  [9cc047cb] Ipopt_jll v3.13.4+1
  [d00139f3] METIS_jll v5.1.0+5
  [d7ed1dd3] MUMPS_seq_jll v5.2.1+4
  [656ef2d0] OpenBLAS32_jll v0.3.12+1
  [7da25872] Osi_jll v0.108.5+4
  [0dad84c5] ArgTools
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL
  [76f85450] LibGit2
  [8f399da3] Libdl
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions
  [44cfe95a] Pkg
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [fa267f1f] TOML
  [a4e569a6] Tar
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll
  [deac9b47] LibCURL_jll
  [29816b5a] LibSSH2_jll
  [c8ffd9c3] MbedTLS_jll
  [14a3606d] MozillaCACerts_jll
  [83775a58] Zlib_jll
  [8e850ede] nghttp2_jll
  [3f19e933] p7zip_jll

julia> using Couenne_jll
ERROR: InitError: could not load library "/home/parallels/.julia/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so"
/home/parallels/.julia/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so: undefined symbol: _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameEij
Stacktrace:
 [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
   @ Base.Libc.Libdl ./libdl.jl:114
 [2] dlopen(s::String, flags::UInt32)
   @ Base.Libc.Libdl ./libdl.jl:114
 [3] macro expansion
   @ ~/.julia/packages/JLLWrappers/WnWcZ/src/products/library_generators.jl:63 [inlined]
 [4] __init__()
   @ Couenne_jll ~/.julia/dev/Couenne_jll/src/wrappers/x86_64-linux-gnu-cxx11.jl:19
 [5] _include_from_serialized(path::String, depmods::Vector{Any})
   @ Base ./loading.jl:674
 [6] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String)
   @ Base ./loading.jl:760
 [7] _require(pkg::Base.PkgId)
   @ Base ./loading.jl:998
 [8] require(uuidkey::Base.PkgId)
   @ Base ./loading.jl:914
 [9] require(into::Module, mod::Symbol)
   @ Base ./loading.jl:901
during initialization of module Couenne_jll

odow · 2021-04-08T21:28:53Z

So it seems the issue is that Couenne is looking for _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameEij, but Clp_jll provides _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameB5cxx11Eij".

Is this something to do with Couenne skipping cxx03?
https://github.com/JuliaPackaging/Yggdrasil/blob/0900c40edc0ababc90bda1f5edb2f9c6e6ae0727/C/Coin-OR/Couenne/build_tarballs.jl#L63-L64

julia> using Couenne_jll
ERROR: InitError: could not load library "/home/parallels/.julia/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so"
/home/parallels/.julia/artifacts/ecc837f417130ef88b6288424541354733c387b1/lib/libCouenne.so: undefined symbol: _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameEij
Stacktrace:
 [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
   @ Base.Libc.Libdl ./libdl.jl:114
 [2] dlopen(s::String, flags::UInt32)
   @ Base.Libc.Libdl ./libdl.jl:114
 [3] macro expansion
   @ ~/.julia/packages/JLLWrappers/WnWcZ/src/products/library_generators.jl:63 [inlined]
 [4] __init__()
   @ Couenne_jll ~/.julia/dev/Couenne_jll/src/wrappers/x86_64-linux-gnu-cxx11.jl:19
 [5] _include_from_serialized(path::String, depmods::Vector{Any})
   @ Base ./loading.jl:674
 [6] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String)
   @ Base ./loading.jl:760
 [7] _require(pkg::Base.PkgId)
   @ Base ./loading.jl:998
 [8] require(uuidkey::Base.PkgId)
   @ Base ./loading.jl:914
 [9] require(into::Module, mod::Symbol)
   @ Base ./loading.jl:901
during initialization of module Couenne_jll

julia> filter(s -> occursin("getRowName", s), split(read(pipeline(`nm $(Clp_jll.libOsiClp)`), String), '\n'))
4-element Vector{SubString{String}}:
 "                 U _ZN18OsiSolverInterface11getRowNamesB5cxx11Ev"
 "0000000000017d20 T _ZNK21OsiClpSolverInterface10getRowNameB5cxx11Eij"
 "                 U _ZNK8ClpModel10getRowNameB5cxx11Ei"
 "0000000000017e20 T _ZTv0_n720_NK21OsiClpSolverInterface10getRowNameB5cxx11Eij"

[noblock]

UUID: f09e9e23-9010-5c9e-b679-9f1d8f79b85c Repo: https://github.com/JuliaBinaryWrappers/Couenne_jll.jl.git Tree: 1b5368978c5628619171a440a1953ddc88dba31a Registrator tree SHA: fc49368213d6dcbacdc444120efa4babcf248dcc

jlbuild temporarily deployed to stopwatch April 7, 2021 23:08 Inactive

This was referenced Apr 8, 2021

[Ipopt] expose libipoptamplinterface JuliaPackaging/Yggdrasil#2787

Merged

[Bonmin] expose libbonminampl JuliaPackaging/Yggdrasil#2788

Merged

giordano closed this Apr 8, 2021

giordano reopened this Apr 8, 2021

giordano temporarily deployed to stopwatch April 8, 2021 20:32 Inactive

giordano force-pushed the registrator/couenne_jll/f09e9e23/v0.5.8+0 branch from 912181c to 9e8385a Compare April 8, 2021 22:32

giordano temporarily deployed to stopwatch April 8, 2021 22:32 Inactive

New package: Couenne_jll v0.5.8+0

bb2e22c

UUID: f09e9e23-9010-5c9e-b679-9f1d8f79b85c Repo: https://github.com/JuliaBinaryWrappers/Couenne_jll.jl.git Tree: 1b5368978c5628619171a440a1953ddc88dba31a Registrator tree SHA: fc49368213d6dcbacdc444120efa4babcf248dcc

jlbuild force-pushed the registrator/couenne_jll/f09e9e23/v0.5.8+0 branch from 9e8385a to bb2e22c Compare April 9, 2021 00:00

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JuliaTagBot merged commit 65fc770 into master Apr 9, 2021

JuliaTagBot deleted the registrator/couenne_jll/f09e9e23/v0.5.8+0 branch April 9, 2021 00:12

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New package: Couenne_jll v0.5.8+0 #33796

New package: Couenne_jll v0.5.8+0 #33796

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New package: Couenne_jll v0.5.8+0 #33796

New package: Couenne_jll v0.5.8+0 #33796

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