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Refactor Before PooledCellPainting #44

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merged 6 commits into from
Aug 29, 2019

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@gwaybio gwaybio commented Aug 29, 2019

Splitting out check_compartments and renaming compress.py to output.py. Also supporting non compressed output in the latter change.

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Codecov Report

Merging #44 into master will decrease coverage by 0.68%.
The diff coverage is 94.04%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #44      +/-   ##
==========================================
- Coverage   96.56%   95.88%   -0.69%     
==========================================
  Files          30       32       +2     
  Lines         962     1046      +84     
==========================================
+ Hits          929     1003      +74     
- Misses         33       43      +10
Impacted Files Coverage Δ
...ominer/tests/test_cyto_utils/test_feature_infer.py 100% <ø> (ø)
pycytominer/tests/test_audit.py 100% <ø> (ø) ⬆️
...er/tests/test_cyto_utils/test_feature_blacklist.py 100% <ø> (ø)
...ycytominer/tests/test_cyto_utils/test_transform.py 100% <ø> (ø)
pycytominer/tests/test_aggregate_profiles.py 100% <100%> (ø) ⬆️
pycytominer/tests/test_normalize.py 100% <100%> (ø) ⬆️
pycytominer/tests/test_cyto_utils/test_output.py 100% <100%> (ø)
pycytominer/cyto_utils/output.py 100% <100%> (ø)
pycytominer/annotate.py 63.63% <100%> (ø) ⬆️
pycytominer/tests/test_cyto_utils/test_util.py 100% <100%> (ø)
... and 9 more

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@gwaybio gwaybio merged commit c9cdc6e into cytomining:master Aug 29, 2019
@gwaybio gwaybio deleted the refactor-before-pooled branch August 29, 2019 21:26
@gwaybio gwaybio mentioned this pull request Aug 30, 2019
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2 participants