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Adding PooledCellPainting #45

Merged
merged 7 commits into from
Aug 30, 2019
Merged

Adding PooledCellPainting #45

merged 7 commits into from
Aug 30, 2019

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gwaybio
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@gwaybio gwaybio commented Aug 30, 2019

The followup PR from #44

Adds pooled/process.py which includes PooledCellPainting. The class stores methods to merge site specific Cells, Nuclei, and Cytoplasm, normalize (using pycytominer.normalize()), and concatenate sites together.

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Codecov Report

Merging #45 into master will increase coverage by 0.33%.
The diff coverage is 94.09%.

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@@            Coverage Diff             @@
##           master      #45      +/-   ##
==========================================
+ Coverage   95.88%   96.21%   +0.33%     
==========================================
  Files          32       34       +2     
  Lines        1046     1349     +303     
==========================================
+ Hits         1003     1298     +295     
- Misses         43       51       +8
Impacted Files Coverage Δ
pycytominer/cyto_utils/util.py 100% <100%> (+43.47%) ⬆️
pycytominer/tests/test_cyto_utils/test_util.py 100% <100%> (ø) ⬆️
pycytominer/pooled/process.py 91.04% <91.04%> (ø)
pycytominer/tests/test_pooled/test_process.py 96.22% <96.22%> (ø)

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@gwaybio gwaybio merged commit 14b3d1b into cytomining:master Aug 30, 2019
@gwaybio gwaybio deleted the add-pooled branch August 30, 2019 20:41
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2 participants