Upgrading Audit Functionality

[gwaybio]

Here I add the option to calculate full pairwise correlations. This is an alternative to calculating pairwise correlations in replicates, randomly shuffling metadata labels and calculating pairwise correlations to define a null, and reporting only median results.

In this pull request I add audit_resolution="full" as a function argument. The default remains audit_resolution="median".

I also address issue #58 (it was a pressing change!)

[codecov-io]

Codecov Report

Merging #60 into master will increase coverage by 0.09%.
The diff coverage is 98.5%.

@@            Coverage Diff             @@
##           master      #60      +/-   ##
==========================================
+ Coverage   96.69%   96.78%   +0.09%     
==========================================
  Files          38       38              
  Lines        1573     1618      +45     
==========================================
+ Hits         1521     1566      +45     
  Misses         52       52

Impacted Files	Coverage Δ
pycytominer/feature_select.py	90% <0%> (-1.67%)	⬇️
pycytominer/tests/test_audit.py	100% <100%> (ø)	⬆️
...ominer/tests/test_cyto_utils/test_feature_infer.py	100% <100%> (ø)	⬆️
pycytominer/cyto_utils/features.py	78.26% <100%> (+2.07%)	⬆️
pycytominer/audit.py	97.26% <100%> (+2.66%)	⬆️
pycytominer/tests/test_feature_select.py	100% <100%> (ø)	⬆️

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