Dependency update - TransDecoder v5.5.0

README.md

@@ -10,7 +10,7 @@ In addition to this README file, you can consult the PlantTribes [manual](docs/P
 PlantTribes pipeline scripts have many external dependencies that need to be installed and available on the environment's $PATH before the pipelines can be used.
 #### Pipelines dependencies
 - **AssemblyPostProcessor pipeline**:  
-[ESTScan (version 2.1)](http://estscan.sourceforge.net/), [TransDecoder (version 3.0.1)](https://github.com/TransDecoder/TransDecoder/releases), [HMMSearch (HMMER version 3.1b1)](http://hmmer.janelia.org/),  
+[ESTScan (version 2.1)](http://estscan.sourceforge.net/), [TransDecoder (version 5.5.0)](https://github.com/TransDecoder/TransDecoder/releases), [HMMSearch (HMMER version 3.1b1)](http://hmmer.janelia.org/),  
 [MAFFT (version 7.215 )](http://mafft.cbrc.jp/alignment/software/), [trimAl (version 1.4.rev8)](http://trimal.cgenomics.org/), and [GenomeTools (version 1.5.4)](http://genometools.org/).
 - **GeneFamilyClassifier pipeline**:  
 [BLASTP (NCBI BLAST version 2.2.29+)](http://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download), and [HMMScan (HMMER version 3.1b1)](http://hmmer.janelia.org/).