v3.0.0 - Snakemake 8 compatible

Breaking change

• This profile works for Snakemake version >=8 workflows using the slurm-executor-plugin.
• For Snakemake versions <=7 use v2.0.0.

If you want to specify resources (e.g., partition) on a workflow basis use workflow-specific profiles.

Full Changelog: v2.0.0...v3.0.0

v2.0.0 - stable version with complete docs

Enhancement

• Parameter partition is not necessary anymore within Snakemake rules.

Breaking change

• use this version to define partition within the resources part of Snakemake rules.

The default is currently shortq, but can be changed in the config file. Very useful in case of usage of external workflows.

Example:

resources:
    mem_mb = 48000,
    partition = "mediumq",

What's Changed

• allow to define the partition within the resources part of rules by @moritzschaefer in #4

New Contributors

• @moritzschaefer made their first contribution in #4

Full Changelog: v1.0.0...v2.0.0

v1.0.0 - stable version with complete docs

Full Changelog: https://github.com/epigen/cemm.slurm.sm/commits/v1.0.0