Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add daily mean ecco dataset to catalog #333

Merged
merged 2 commits into from
Mar 24, 2023
Merged

Add daily mean ecco dataset to catalog #333

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
028090f
Add daily mean ecco dataset to catalog
MaceKuailv Mar 24, 2023
a558706
missing style changes
MaceKuailv Mar 24, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
134 changes: 133 additions & 1 deletion sciserver_catalogs/catalog_xarray.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -775,7 +775,7 @@ sources:
# ======================================================================
# ECCOv4r4 data
ECCO_v4r4:
description: ECCO version 4 release 4 dataset with fields necessary to close heat, salt and volume budgets
description: ECCO version 4 release 4 monthly mean dataset with fields necessary to close heat, salt and volume budgets
driver: zarr
model: MITGCM
args:
Expand Down Expand Up @@ -870,6 +870,138 @@ sources:
projection:
original_output: monthly mean

# ECCOv4r4 data
daily_ecco_grid:
description: ECCO version 4 release 4 grid
driver: netcdf
model: MITGCM
args:
urlpath: '/home/idies/workspace/poseidon/data03_02/daily_mean_ecco/ECCO-GRID.nc'
#drop_variables: ['k_u', 'k_p1', 'k_l', 'k']
metadata:
swap_dims:
k: Z
k_p1: Zp1
k_u: Zu
k_l: Zl
rename:
tile: face
i: X
j: Y
i_g: Xp1
j_g: Yp1
hFacC: HFacC
hFacS: HFacS
hFacW: HFacW
parameters:
rSphere: 6.371e+03
eq_state: jmd95
rho0: 1027
g: 9.81
eps_nh: 0
omega: 7.292123516990373e-05
c_p: 3.986e+03
tempFrz0: 9.01e-02
dTempFrz_dS: -5.75e-02
name: ECCO_v4r4
description: ECCO v4r4 3D dataset, ocean simulations on LLC90 grid
citation:
projection:
original_output: monthly mean

# ECCOv4r4 data daily
daily_ecco_snap:
description: ECCO version 4 release 4 daily mean dataset with fields necessary to close heat, salt and volume budgets
driver: zarr
model: MITGCM
args:
urlpath: '/home/idies/workspace/poseidon/data0*_02/daily_mean_ecco/zarr/snap*'
drop_variables: ['XC', 'YC']
xarray_kwargs:
engine: zarr
parallel: true
metadata:
name: ECCO_v4r4
description: ECCO v4r4 3D dataset, ocean simulations on LLC90 grid
citation:
projection:
original_output: daily snapshot

# ECCOv4r4 data daily
daily_ecco_mean:
description: ECCO version 4 release 4 daily mean dataset with fields necessary to close heat, salt and volume budgets
driver: zarr
model: MITGCM
args:
urlpath: '/home/idies/workspace/poseidon/data0*_02/daily_mean_ecco/zarr/mean*'
drop_variables: ['XC', 'YC', 'XG', 'YG', 'time_midp']
xarray_kwargs:
engine: zarr
parallel: true
metadata:
grid_coords:
add_midp: true
grid_coords:
Y:
Y:
Yp1: -0.5
X:
X:
Xp1: -0.5
Z:
Z:
Zp1: 0.5
Zu: 0.5
Zl: -0.5
time:
time: -0.5
face_connections: # topology
face_connections:
face:
0:
X: tuple(((12, 'Y', False), (3, 'X', False)))
Y: tuple((None,(1,'Y',False)))
1:
X: tuple(((11,'Y',False),(4,'X',False)))
Y: tuple(((0,'Y',False),(2,'Y',False)))
2:
X: tuple(((10,'Y',False),(5, 'X', False)))
Y: tuple(((1, 'Y', False), (6, 'X', False)))
3:
X: tuple(((0, 'X', False), (9, 'Y', False)))
Y: tuple((None, (4, 'Y', False)))
4:
X: tuple(((1, 'X', False), (8, 'Y', False)))
Y: tuple(((3, 'Y', False), (5, 'Y', False)))
5:
X: tuple(((2, 'X', False), (7, 'Y', False)))
Y: tuple(((4, 'Y', False), (6, 'Y', False)))
6:
X: tuple(((2, 'Y', False), (7, 'X', False)))
Y: tuple(((5, 'Y', False), (10, 'X', False)))
7:
X: tuple(((6, 'X', False), (8, 'X', False)))
Y: tuple(((5, 'X', False), (10, 'Y', False)))
8:
X: tuple(((7, 'X', False), (9, 'X', False)))
Y: tuple(((4, 'X', False), (11, 'Y', False)))
9:
X: tuple(((8, 'X', False), None))
Y: tuple(((3, 'X', False), (12, 'Y', False)))
10:
X: tuple(((6, 'Y', False), (11, 'X', False)))
Y: tuple(((7, 'Y', False), (2, 'X', False)))
11:
X: tuple(((10, 'X', False), (12, 'X', False)))
Y: tuple(((8, 'Y', False), (1, 'X', False)))
12:
X: tuple(((11, 'X', False), None))
Y: tuple(((9, 'Y', False), (0, 'X', False)))
name: ECCO_v4r4
description: ECCO v4r4 3D dataset, ocean simulations on LLC90 grid
citation:
projection:
original_output: daily mean

# ======================================================================
# HyCOM data test, interpolated onto lat-lon-depth coords
Expand Down