VODKA-v0.1f

bug fixes

• accepts symbolic link input
• make_fa_for_each_ac.pl bug fix

VODKA-v0.1e

NEWS

• generates html report
  • outputs sequence logo and fasta file for each breakpoint (A_C)
• infers maximum read length and uses it for building potential DVG index instead of using 100bp segments

v0.1c

NEWS

• filters DVG mappers that map to full genome using end-to-end alignment.
• for the last 100bp of the genome, allows seq length to go down to 25bp.
• properly deals with insertions and deletions.
• mapped_only column has been added to the results spreadsheet.