Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

respect LOCATION_FILTER_THRESHOLD config, adjust sf_thresh range from 0.0001 to 0.99 #100

Closed
wants to merge 2 commits into from
Closed

respect LOCATION_FILTER_THRESHOLD config, adjust sf_thresh range from 0.0001 to 0.99 #100

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
99de764
respect location_filter_threshold config
bartman081523 Apr 19, 2023
5466b0e
sf_thresh range 0.0001 to 0.99
bartman081523 Apr 19, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 5 additions & 2 deletions analyze.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -394,7 +394,7 @@ def analyzeFile(item):
parser.add_argument('--threads', type=int, default=4, help='Number of CPU threads.')
parser.add_argument('--batchsize', type=int, default=1, help='Number of samples to process at the same time. Defaults to 1.')
parser.add_argument('--locale', default='en', help='Locale for translated species common names. Values in [\'af\', \'de\', \'it\', ...] Defaults to \'en\'.')
parser.add_argument('--sf_thresh', type=float, default=0.03, help='Minimum species occurrence frequency threshold for location filter. Values in [0.01, 0.99]. Defaults to 0.03.')
parser.add_argument('--sf_thresh', type=float, help='Minimum species occurrence frequency threshold for location filter. Values in [0.0001, 0.99]. Defaults to 0.03.')
parser.add_argument('--classifier', default=None, help='Path to custom trained classifier. Defaults to None. If set, --lat, --lon and --locale are ignored.')

args = parser.parse_args()
Expand Down Expand Up @@ -431,7 +431,10 @@ def analyzeFile(item):

# Load species list from location filter or provided list
cfg.LATITUDE, cfg.LONGITUDE, cfg.WEEK = args.lat, args.lon, args.week
cfg.LOCATION_FILTER_THRESHOLD = max(0.01, min(0.99, float(args.sf_thresh)))
if args.sf_thresh is not None:
cfg.LOCATION_FILTER_THRESHOLD = max(0.0001, min(0.99, float(args.sf_thresh)))
if args.sf_thresh is None and cfg.LOCATION_FILTER_THRESHOLD is None:
cfg.LOCATION_FILTER_THRESHOLD = 0.03
if cfg.LATITUDE == -1 and cfg.LONGITUDE == -1:
if len(args.slist) == 0:
cfg.SPECIES_LIST_FILE = None
Expand Down