Highlights
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Pinned Loading
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analysis_pipelines
analysis_pipelines PublicAnalysis pipelines for statistical genetic analysis
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HarteminkLab/TOP
HarteminkLab/TOP PublicR package to predict TF occupancy using DNase-seq or ATAC-seq data
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GSFA_paper
GSFA_paper PublicForked from xinhe-lab/GSFA_paper
Analysis code for the GSFA manuscript "A novel Bayesian factor analysis method improves detection of genes and biological processes affected by perturbations in single-cell CRISPR screening"
R
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mapgen
mapgen PublicForked from xinhe-lab/mapgen
R package to perform gene mapping using functionally-informed genetic fine mapping
R
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GSFA
GSFA PublicForked from xinhe-lab/GSFA
R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening data.
C++
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stephenslab/scATACseq-topics
stephenslab/scATACseq-topics PublicAnalysis of single-cell ATAC-seq data using topic models.
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