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feat: allow reconstruction of amino acid sequences #1504

feat: allow reconstruction of amino acid sequences

feat: allow reconstruction of amino acid sequences #1504

Triggered via pull request July 22, 2023 12:46
Status Failure
Total duration 6m 8s
Artifacts 8
This run and associated checks have been archived and are scheduled for deletion. Learn more about checks retention

ci.yaml

on: pull_request
Matrix: pytest-cram
build-docs  /  build-conda
0s
build-docs / build-conda
build-docs  /  build-pip
2m 0s
build-docs / build-pip
Matrix: pathogen-ci
codecov
0s
codecov
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37 errors and 15 warnings
test (python=3.7 biopython=1.76)
Process completed with exit code 2.
test (python=3.8 biopython=1.80)
The job was canceled because "_3_7_1_76" failed.
test (python=3.8 biopython=1.80)
The operation was canceled.
test (python=3.7 biopython=latest)
The job was canceled because "_3_7_1_76" failed.
test (python=3.7 biopython=latest)
The operation was canceled.
test (python=3.8 biopython=1.79)
The job was canceled because "_3_7_1_76" failed.
test (python=3.8 biopython=1.79)
The operation was canceled.
test (python=3.7 biopython=1.79)
The job was canceled because "_3_7_1_76" failed.
test (python=3.7 biopython=1.79)
The operation was canceled.
test (python=3.10 biopython=latest)
The job was canceled because "_3_7_1_76" failed.
test (python=3.10 biopython=latest)
The operation was canceled.
test (python=3.10 biopython=1.80)
The job was canceled because "_3_7_1_76" failed.
test (python=3.10 biopython=1.80)
The operation was canceled.
test (python=3.8 biopython=latest)
The job was canceled because "_3_7_1_76" failed.
test (python=3.8 biopython=latest)
The operation was canceled.
test (python=3.9 biopython=1.80)
The job was canceled because "_3_7_1_76" failed.
test (python=3.9 biopython=1.80)
The operation was canceled.
test (python=3.9 biopython=1.79)
The job was canceled because "_3_7_1_76" failed.
test (python=3.9 biopython=1.79)
The operation was canceled.
test (python=3.9 biopython=latest)
The job was canceled because "_3_7_1_76" failed.
test (python=3.9 biopython=latest)
The operation was canceled.
test (python=3.8 biopython=1.76)
The job was canceled because "_3_7_1_76" failed.
test (python=3.8 biopython=1.76)
The operation was canceled.
test (python=3.11 biopython=latest)
The job was canceled because "_3_7_1_76" failed.
test (python=3.11 biopython=latest)
The operation was canceled.
test (python=3.7 biopython=1.73)
The job was canceled because "_3_7_1_76" failed.
test (python=3.7 biopython=1.73)
The operation was canceled.
test (python=3.11 biopython=1.80)
The job was canceled because "_3_7_1_76" failed.
test (python=3.11 biopython=1.80)
The operation was canceled.
test-pathogen-repo-ci (avian-flu)
Process completed with exit code 1.
test-pathogen-repo-ci (lassa)
Process completed with exit code 1.
test-pathogen-repo-ci (monkeypox)
Process completed with exit code 1.
test-pathogen-repo-ci (mumps)
Process completed with exit code 1.
test-pathogen-repo-ci (ebola)
Process completed with exit code 1.
test-pathogen-repo-ci (ncov)
Process completed with exit code 1.
test-pathogen-repo-ci (seasonal-flu)
Process completed with exit code 1.
test-pathogen-repo-ci (zika)
Process completed with exit code 1.
test (python=3.7 biopython=1.76)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.7 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=1.79)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.7 biopython=1.79)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.10 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.10 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=1.79)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=1.76)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.11 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.7 biopython=1.73)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.11 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!

Artifacts

Produced during runtime
Name Size
output-avian-flu Expired
241 KB
output-ebola Expired
1.74 MB
output-lassa Expired
422 KB
output-monkeypox Expired
23 MB
output-mumps Expired
2.57 MB
output-ncov Expired
3.96 MB
output-seasonal-flu Expired
47.8 KB
output-zika Expired
736 KB