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DOC/CLN: Fix errors in Series docstrings #24945

Merged
merged 29 commits into from
Feb 7, 2019
Merged

DOC/CLN: Fix errors in Series docstrings #24945

merged 29 commits into from
Feb 7, 2019

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dsaxton
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@dsaxton dsaxton commented Jan 26, 2019

Fixes (or starts to fix) a few errors in Series docstrings. On a related note, it seems validate_docstrings.py yields this error for a large number of docstrings:

The first line of the Returns section should contain only the type, unless multiple values are being returned

which seems to happen whenever the return value is named. Should these be errors?

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codecov bot commented Jan 26, 2019

Codecov Report

Merging #24945 into master will not change coverage.
The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff           @@
##           master   #24945   +/-   ##
=======================================
  Coverage   92.37%   92.37%           
=======================================
  Files         166      166           
  Lines       52388    52388           
=======================================
  Hits        48396    48396           
  Misses       3992     3992
Flag Coverage Δ
#multiple 90.8% <ø> (ø) ⬆️
#single 42.9% <ø> (ø) ⬆️
Impacted Files Coverage Δ
pandas/core/series.py 93.68% <ø> (ø) ⬆️

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codecov bot commented Jan 26, 2019

Codecov Report

Merging #24945 into master will decrease coverage by 0.02%.
The diff coverage is n/a.

Impacted file tree graph

@@            Coverage Diff             @@
##           master   #24945      +/-   ##
==========================================
- Coverage   92.37%   92.35%   -0.03%     
==========================================
  Files         166      166              
  Lines       52408    52314      -94     
==========================================
- Hits        48412    48312     -100     
- Misses       3996     4002       +6
Flag Coverage Δ
#multiple 90.78% <ø> (-0.01%) ⬇️
#single 42.84% <ø> (-0.03%) ⬇️
Impacted Files Coverage Δ
pandas/core/series.py 93.69% <ø> (ø) ⬆️
pandas/core/groupby/ops.py 94.15% <0%> (-2.58%) ⬇️
pandas/core/generic.py 96.39% <0%> (-0.24%) ⬇️
pandas/core/groupby/generic.py 86.98% <0%> (-0.18%) ⬇️
pandas/core/frame.py 96.65% <0%> (-0.16%) ⬇️
pandas/core/internals/managers.py 95.95% <0%> (-0.11%) ⬇️
pandas/util/testing.py 88.05% <0%> (-0.09%) ⬇️
pandas/core/internals/blocks.py 94.1% <0%> (-0.07%) ⬇️
pandas/core/resample.py 97.22% <0%> (-0.02%) ⬇️
pandas/core/panel.py 97.9% <0%> (-0.01%) ⬇️
... and 16 more

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pep8speaks commented Jan 26, 2019

Hello @dsaxton! Thanks for updating the PR.

Cheers ! There are no PEP8 issues in this Pull Request. 🍻

Comment last updated on February 07, 2019 at 01:56 Hours UTC

@jreback jreback added the Docs label Jan 26, 2019
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WillAyd commented Jan 26, 2019

which seems to happen whenever the return value is named. Should these be errors?

Yea this is intentional. Unless multiple values are being returned should just have a type in the Returns section

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Minor comments but generally look good. How do the validation scripts look against these?

@@ -3002,7 +3012,7 @@ def argsort(self, axis=0, kind='quicksort', order=None):

Returns
-------
argsorted : Series, with -1 indicated where nan values are present
Series, with -1 indicated where nan values are present
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Split this into a type and description

max_rows : int, optional
Maximum number of rows to show before truncating. If None, show
all.

Returns
-------
formatted : string (if not buffer passed)
str or None
String representation of Series if buf=None, otherwise None.
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You can put code blocks in double backticks for better rendering, so ``buf=None``

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dsaxton commented Jan 31, 2019

This should be the output for the docstrings edited so far in this PR.

to_string

3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.to_string" correct. :)

to_dict

2 Warnings found:
	No extended summary found
	See Also section not found
Docstring for "pandas.core.series.Series.to_dict" correct. :)

to_frame

3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.to_frame" correct. :)

to_sparse

(I think the first error is wrong here because "integer" is actually a string in the docstring. For this one I'm not familiar enough with the method to add a good description. Also, I think this will be deprecated soon anyways?)

2 Errors found:
	Parameter "kind" type should use "int" instead of "integer"
	Parameter "kind" has no description
3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found

count

3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.count" correct. :)

mode

2 Warnings found:
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.mode" correct. :)

drop_duplicates

(This is another one where the lowercase letter is an argument option.)

1 Errors found:
	Parameter "keep" description should start with a capital letter
1 Warnings found:
	No extended summary found

duplicated

(Same here.)

1 Errors found:
	Parameter "keep" description should start with a capital letter

idxmin

2 Errors found:
	Parameters {*args, **kwargs} not documented
	Unknown parameters {*args, **kwargs}

idxmax

2 Errors found:
	Parameters {*args, **kwargs} not documented
	Unknown parameters {*args, **kwargs}

round

1 Errors found:
	Parameters {**kwargs, *args} not documented
2 Warnings found:
	No extended summary found
	No examples section found

quantile

6 Errors found:
	Parameter "q" description should start with a capital letter
	Parameter "q" description should finish with "."
	Parameter "interpolation" has no description
	Return value description should start with a capital letter
	Missing description for See Also "core.window.Rolling.quantile" reference
	Missing description for See Also "numpy.percentile" reference

corr

6 Errors found:
	Parameter "other" has no description
	Parameter "method" description should start with a capital letter
	Parameter "method" description should finish with "."
	Parameter "min_periods" description should finish with "."
	Return value has no description
	flake8 error: E124 closing bracket does not match visual indentation
2 Warnings found:
	No extended summary found
	See Also section not found

cov

4 Errors found:
	Parameter "other" has no description
	Parameter "min_periods" description should finish with "."
	Return value has no description
	Return value has no description
3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found

diff

Docstring for "pandas.core.series.Series.diff" correct. :)

append

6 Errors found:
	Parameter "to_append" has no description
	Parameter "ignore_index" type should use "bool" instead of "boolean"
	Parameter "verify_integrity" type should use "bool" instead of "boolean"
	Parameter "verify_integrity" description should finish with "."
	Return value has no description
	flake8 error: E231 missing whitespace after ',' (2 times)
1 Warnings found:
	No extended summary found

sort_index

Docstring for "pandas.core.series.Series.sort_index" correct. :)

argsort

4 Errors found:
	Summary must start with infinitive verb, not third person (e.g. use "Generate" instead of "Generates")
	Summary should fit in a single line
	Parameter "kind" description should finish with "."
	Missing description for See Also "numpy.ndarray.argsort" reference
1 Warnings found:
	No examples section found

swaplevel

4 Errors found:
	Parameters {j, copy, i} not documented
	Unknown parameters {i, j}
	Parameter "i, j" type should use "str" instead of "string"
	Return value has no description
3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found

unstack

7 Errors found:
	Summary should fit in a single line
	Parameter "level" type should use "str" instead of "string"
	Parameter "level" description should finish with "."
	Parameter "fill_value" description should start with a capital letter
	Parameter "fill_value" description should finish with "."
	Return value has no description
	flake8 error: E128 continuation line under-indented for visual indent
1 Warnings found:
	See Also section not found

rename

7 Errors found:
	Parameters {**kwargs} not documented
	Unknown parameters {level, inplace, copy}
	Parameter "index" description should start with a capital letter
	Parameter "copy" description should finish with "."
	Return value has no description
	Missing description for See Also "Series.rename_axis" reference
	flake8 error: E261 at least two spaces before inline comment

drop

4 Errors found:
	Parameters {columns, index} not documented
	Unknown parameters {index, columns}
	Return value has no description
	flake8 error: E231 missing whitespace after ',' (3 times)

isin

Docstring for "pandas.core.series.Series.isin" correct. :)

between

Docstring for "pandas.core.series.Series.between" correct. :)

from_csv

3 Errors found:
	Parameter "path" has no description
	Return value has no description
	Missing description for See Also "read_csv" reference
1 Warnings found:
	No examples section found

valid

2 Errors found:
	Parameters {inplace, **kwargs} not documented
	No Returns section found
2 Warnings found:
	See Also section not found
	No examples section found

to_period

2 Errors found:
	Summary should fit in a single line
	Parameters {copy} not documented
2 Warnings found:
	See Also section not found
	No examples section found

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dsaxton commented Jan 31, 2019

@WillAyd Side question, but when I merge with master on GitHub, how do I prevent lots of unrelated files from being marked as edited in my PR when I pull locally and then later push?

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WillAyd commented Jan 31, 2019

Typically I would do the below locally on branch in question

git fetch upstream
git merge upstream/master
<FIX CONFLICTS IF ANY, then git merge --continue>
git push origin your-branch-name

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jreback commented Feb 4, 2019

can you merge master

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WillAyd commented Feb 6, 2019

@dsaxton seeing some movement on this and maybe other PRs. Please ping when you are ready for review

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dsaxton commented Feb 6, 2019

@WillAyd Would be happy to have you take a look whenever you get a chance

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WillAyd commented Feb 6, 2019

Thanks - latest version looks like a good improvement over what was there previously. Can you provide updated script validations? Probably OK to leave a few out there for follow up PRs just want to make sure we haven't increased number of errors before approving

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dsaxton commented Feb 7, 2019

@WillAyd Still some errors / warnings here and there (some of which I don't think are real, others I'm not certain of the fix), but I think we've cleaned up a good chunk of them.

to_string

3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.to_string" correct. :)

to_dict

2 Warnings found:
	No extended summary found
	See Also section not found
Docstring for "pandas.core.series.Series.to_dict" correct. :)

to_frame

2 Warnings found:
	No extended summary found
	See Also section not found
Docstring for "pandas.core.series.Series.to_frame" correct. :)

to_sparse

2 Errors found:
	Parameter "kind" type should use "int" instead of "integer"
	Parameter "kind" has no description
3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found

count

2 Warnings found:
	No extended summary found
	See Also section not found
Docstring for "pandas.core.series.Series.count" correct. :)

mode

2 Warnings found:
	See Also section not found
	No examples section found
Docstring for "pandas.core.series.Series.mode" correct. :)

drop_duplicates

1 Errors found:
	Parameter "keep" description should start with a capital letter
1 Warnings found:
	No extended summary found

duplicated

1 Errors found:
	Parameter "keep" description should start with a capital letter

idxmin

2 Errors found:
	Parameters {**kwargs, *args} not documented
	Unknown parameters {*args, **kwargs}

idxmax

2 Errors found:
	Parameters {**kwargs, *args} not documented
	Unknown parameters {*args, **kwargs}

round

1 Errors found:
	Parameters {*args, **kwargs} not documented
1 Warnings found:
	No extended summary found

quantile

4 Errors found:
	Parameter "q" description should start with a capital letter
	Parameter "interpolation" has no description
	Missing description for See Also "core.window.Rolling.quantile" reference
	Missing description for See Also "numpy.percentile" reference
1 Warnings found:
	No extended summary found

corr

(flake8 is complaining about this code block, which I don't think is necessarily wrong.)

        >>> def histogram_intersection(a, b):
        ...     v = np.minimum(a, b).sum().round(decimals=1)
        ...     return v
        >>> s1 = pd.Series([.2, .0, .6, .2])
        >>> s2 = pd.Series([.3, .6, .0, .1])
        >>> s1.corr(s2, method=histogram_intersection)
        0.3

4 Errors found:
	Parameter "method" description should start with a capital letter
	Parameter "method" description should finish with "."
	flake8 error: E302 expected 2 blank lines, found 0
	flake8 error: E305 expected 2 blank lines after class or function definition, found 0
2 Warnings found:
	No extended summary found
	See Also section not found

cov

2 Warnings found:
	No extended summary found
	See Also section not found
Docstring for "pandas.core.series.Series.cov" correct. :)

diff

Docstring for "pandas.core.series.Series.diff" correct. :)

append

1 Warnings found:
	No extended summary found
Docstring for "pandas.core.series.Series.append" correct. :)

sort_index

Docstring for "pandas.core.series.Series.sort_index" correct. :)

argsort

4 Errors found:
	Summary must start with infinitive verb, not third person (e.g. use "Generate" instead of "Generates")
	Summary should fit in a single line
	Parameter "kind" description should finish with "."
	Missing description for See Also "numpy.ndarray.argsort" reference
1 Warnings found:
	No examples section found

swaplevel

2 Errors found:
	Parameters {i, j, copy} not documented
	Unknown parameters {i, j}
3 Warnings found:
	No extended summary found
	See Also section not found
	No examples section found

unstack

1 Errors found:
	Summary should fit in a single line
1 Warnings found:
	See Also section not found

rename

3 Errors found:
	Parameters {**kwargs} not documented
	Unknown parameters {level, copy, inplace}
	Parameter "index" description should start with a capital letter

drop

2 Errors found:
	Parameters {columns, index} not documented
	Unknown parameters {index, columns}

isin

Docstring for "pandas.core.series.Series.isin" correct. :)

between

Docstring for "pandas.core.series.Series.between" correct. :)

from_csv

3 Errors found:
	Parameter "path" has no description
	Return value has no description
	Missing description for See Also "read_csv" reference
1 Warnings found:
	No examples section found

valid

2 Errors found:
	Parameters {**kwargs, inplace} not documented
	No Returns section found
2 Warnings found:
	See Also section not found
	No examples section found

to_period

1 Errors found:
	Summary should fit in a single line
2 Warnings found:
	See Also section not found
	No examples section found

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WillAyd commented Feb 7, 2019

Makes sense. I checked most remaining and most are errors with the validator itself (ex: things that start with bullet points in description). I think this is a good enough improvement to move forward so we don't get stuck in a holding pattern forever.

cc @datapythonista - looks like there might be a new error for the below line, where 'integer' is a valid argument but the validator complains about it not being written out as int. I'll open up an issue for that separately

@WillAyd WillAyd added this to the 0.25.0 milestone Feb 7, 2019
@WillAyd WillAyd merged commit 5278cc6 into pandas-dev:master Feb 7, 2019
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WillAyd commented Feb 7, 2019

Thanks @dsaxton !

@dsaxton dsaxton deleted the series-doc branch February 7, 2019 13:40
thoo added a commit to thoo/pandas that referenced this pull request Feb 7, 2019
* upstream/master:
  DOC: Fix validation type error SA05 (pandas-dev#25208)
  REF: Add more pytest idiom to test_holiday.py (pandas-dev#25204)
  DOC/CLN: Fix errors in Series docstrings (pandas-dev#24945)
  TST: follow-up to Test nested pandas array pandas-dev#24993 (pandas-dev#25155)
  modernize compat imports (pandas-dev#25192)
  fix MacPython pandas-wheels failure (pandas-dev#25186)
  BUG: DataFrame.merge(suffixes=) does not respect None (pandas-dev#24819)
  DEPR: remove PanelGroupBy, disable DataFrame.to_panel (pandas-dev#25047)
  DOC: update docstring for series.nunique (pandas-dev#25116)
  CLN: Use ABCs in set_index (pandas-dev#25128)
  BLD: pin cython language level to '2' (pandas-dev#25145)
  DOC: Updates to Timestamp document (pandas-dev#25163)
  STY: use pytest.raises context manager (indexes/multi) (pandas-dev#25175)
  Fixed tuple to List Conversion in Dataframe class (pandas-dev#25089)
Pingviinituutti pushed a commit to Pingviinituutti/pandas that referenced this pull request Feb 28, 2019
Pingviinituutti pushed a commit to Pingviinituutti/pandas that referenced this pull request Feb 28, 2019
the-nose-knows added a commit to the-nose-knows/pandas that referenced this pull request Mar 9, 2019
* ERR/TST: Add pytest idiom to dtypes/test_cast.py (pandas-dev#24847)

* fix MacPython pandas-wheels failue (pandas-dev#24851)

* DEPS: Bump pyarrow min version to 0.9.0 (pandas-dev#24854)

Closes pandas-devgh-24767

* DOC: Document AttributeError for accessor (pandas-dev#24855)

Closes pandas-dev#20579

* Start whatsnew for 0.24.1 and 0.25.0 (pandas-dev#24848)

* DEPR/API: Non-ns precision in Index constructors (pandas-dev#24806)

* BUG: Format mismatch doesn't coerce to NaT (pandas-dev#24815)

* BUG: Properly parse unicode usecols names in CSV (pandas-dev#24856)

* CLN: fix typo in asv eval.Query suite (pandas-dev#24865)

* BUG: DataFrame respects dtype with masked recarray (pandas-dev#24874)

* REF/CLN: Move private method (pandas-dev#24875)

* BUG : ValueError in case on NaN value in groupby columns (pandas-dev#24850)

* BUG: fix floating precision formatting in presence of inf (pandas-dev#24863)

* DOC: Creating top-level user guide section, and moving pages inside (pandas-dev#24677)

* DOC: Creating top-level development section, and moving pages inside (pandas-dev#24691)

* DOC: Creating top-level getting started section, and moving pages inside (pandas-dev#24678)

* DOC: Implementing redirect system, and adding user_guide redirects (pandas-dev#24715)

* DOC: Implementing redirect system, and adding user_guide redirects

* Using relative urls for the redirect

* Validating that no file is overwritten by a redirect

* Adding redirects for getting started and development sections

* DOC: fixups (pandas-dev#24888)

* Fixed heading on whatnew
* Remove empty scalars.rst

* CLN: fix typo in ctors.SeriesDtypesConstructors setup (pandas-dev#24894)

* DOC: No clean in sphinx_build (pandas-dev#24902)

Closes pandas-dev#24727

* BUG (output formatting): use fixed with for truncation column instead of inferring from last column (pandas-dev#24905)

* DOC: also redirect old whatsnew url (pandas-dev#24906)

* Revert BUG-24212 fix usage of Index.take in pd.merge (pandas-dev#24904)

* Revert BUG-24212 fix usage of Index.take in pd.merge

xref pandas-dev#24733
xref pandas-dev#24897

* test 0.23.4 output

* added note about buggy test

* DOC: Add experimental note to DatetimeArray and TimedeltaArray (pandas-dev#24882)

* DOC: Add experimental note to DatetimeArray and TimedeltaArray

* Disable M8 in nanops (pandas-dev#24907)

* Disable M8 in nanops

Closes pandas-dev#24752

* CLN: fix typo in asv benchmark of non_unique_sorted, which was not sorted (pandas-dev#24917)

* API/VIS: remove misc plotting methods from plot accessor (revert pandas-dev#23811) (pandas-dev#24912)

* DOC: some 0.24.0 whatsnew clean-up (pandas-dev#24911)

* DOC: Final reorganization of documentation pages (pandas-dev#24890)

* DOC: Final reorganization of documentation pages

* Move ecosystem to top level

* DOC: Adding redirects to API moved pages (pandas-dev#24909)

* DOC: Adding redirects to API moved pages

* DOC: Making home page links more compact and clearer (pandas-dev#24928)

* DOC: 0.24 release date (pandas-dev#24930)

* DOC: Adding version to the whatsnew section in the home page (pandas-dev#24929)

* API: Remove IntervalArray from top-level (pandas-dev#24926)

* RLS: 0.24.0

* DEV: Start 0.25 cycle

* DOC: State that we support scalars in to_numeric (pandas-dev#24944)

We support it and test it already.

xref pandas-devgh-24910.

* DOC: Minor what's new fix (pandas-dev#24933)

* TST: GH#23922 Add missing match params to pytest.raises (pandas-dev#24937)

* Add tests for NaT when performing dt.to_period (pandas-dev#24921)

* DOC: switch headline whatsnew to 0.25 (pandas-dev#24941)

* BUG-24212 fix regression in pandas-dev#24897 (pandas-dev#24916)

* CLN: reduce overhead in setup for categoricals benchmarks in asv (pandas-dev#24913)

* Excel Reader Refactor - Base Class Introduction (pandas-dev#24829)

* TST/REF: Add pytest idiom to test_numeric.py (pandas-dev#24946)

* BLD: silence npy_no_deprecated warnings with numpy>=1.16.0 (pandas-dev#24864)

* CLN: Refactor cython to use memory views (pandas-dev#24932)

* DOC: Clean sort_values and sort_index docstrings (pandas-dev#24843)

* STY: use pytest.raises context syntax (indexing) (pandas-dev#24960)

* Fixed itertuples usage in to_dict (pandas-dev#24965)

* Fixed itertuples usage in to_dict

Closes pandas-dev#24940
Closes pandas-dev#24939

* STY: use pytest.raises context manager (resample) (pandas-dev#24977)

* DOC: Document breaking change to read_csv (pandas-dev#24989)

* DEPR: Fixed warning for implicit registration (pandas-dev#24964)

*  STY: use pytest.raises context manager (indexes/datetimes) (pandas-dev#24995)

* DOC: move whatsnew note of pandas-dev#24916 (pandas-dev#24999)

* BUG: Fix broken links (pandas-dev#25002)

The previous location of contributing.rst file was
/doc/source/contributing.rst but has been moved to
/doc/source/development/contributing.rst

* fix for BUG: grouping with tz-aware: Values falls after last bin (pandas-dev#24973)

* REGR: Preserve order by default in Index.difference (pandas-dev#24967)

Closes pandas-dev#24959

* CLN: do not use .repeat asv setting for storing benchmark data (pandas-dev#25015)

* CLN: isort asv_bench/benchmark/algorithms.py (pandas-dev#24958)

* fix+test to_timedelta('NaT', box=False) (pandas-dev#24961)

* PERF: significant speedup in sparse init and ops by using numpy in check_integrity (pandas-dev#24985)

* BUG: Fixed merging on tz-aware (pandas-dev#25033)

* Test nested PandasArray (pandas-dev#24993)

* DOC: fix error in documentation pandas-dev#24981 (pandas-dev#25038)

* BUG: support dtypes in column_dtypes for to_records() (pandas-dev#24895)

* Makes example from docstring work (pandas-dev#25035)

* CLN: typo fixups (pandas-dev#25028)

* BUG: to_datetime(strs, utc=True) used previous UTC offset (pandas-dev#25020)

* BUG: Better handle larger numbers in to_numeric (pandas-dev#24956)

* BUG: Better handle larger numbers in to_numeric

* Warn about lossiness when passing really large
numbers that exceed (u)int64 ranges.

* Coerce negative numbers to float when requested
instead of crashing and returning object.

* Consistently parse numbers as integers / floats,
even if we know that the resulting container has
to be float. This is to ensure consistent error
behavior when inputs numbers are too large.

Closes pandas-devgh-24910.

* MAINT: Address comments

* BUG: avoid usage in_qtconsole for recent IPython versions (pandas-dev#25039)

* Drop IPython<4.0 compat

* Revert "Drop IPython<4.0 compat"

This reverts commit 0cb0452.

* update
a
* whatsnew

* REGR: fix read_sql delegation for queries on MySQL/pymysql (pandas-dev#25024)

* DOC: Start 0.24.2.rst (pandas-dev#25026)

[ci skip]

* REGR: rename_axis with None should remove axis name (pandas-dev#25069)

* clarified the documentation for DF.drop_duplicates (pandas-dev#25056)

* Clarification in docstring of Series.value_counts (pandas-dev#25062)

* ENH: Support fold argument in Timestamp.replace (pandas-dev#25046)

* CLN: to_pickle internals (pandas-dev#25044)

* Implement+Test Tick.__rtruediv__ (pandas-dev#24832)

* API: change Index set ops sort=True -> sort=None (pandas-dev#25063)

* BUG: to_clipboard text truncated for Python 3 on Windows for UTF-16 text (pandas-dev#25040)

* PERF: use new to_records() argument in to_stata() (pandas-dev#25045)

* DOC: Cleanup 0.24.1 whatsnew (pandas-dev#25084)

* Fix quotes position in pandas.core, typos and misspelled parameters. (pandas-dev#25093)

* CLN: Remove sentinel_factory() in favor of object() (pandas-dev#25074)

* TST: remove DST transition scenarios from tc pandas-dev#24689 (pandas-dev#24736)

* BLD: remove spellcheck from Makefile (pandas-dev#25111)

* DOC: small clean-up of 0.24.1 whatsnew (pandas-dev#25096)

* DOC: small doc fix to Series.repeat (pandas-dev#25115)

* TST: tests for categorical apply (pandas-dev#25095)

* CLN: use dtype in constructor (pandas-dev#25098)

* DOC: frame.py doctest fixing (pandas-dev#25097)

* DOC: 0.24.1 release (pandas-dev#25125)

[ci skip]

* Revert set_index inspection/error handling for 0.24.1 (pandas-dev#25085)

* DOC: Minor what's new fix (pandas-dev#24933)

* Backport PR pandas-dev#24916: BUG-24212 fix regression in pandas-dev#24897 (pandas-dev#24951)

* Revert "Backport PR pandas-dev#24916: BUG-24212 fix regression in pandas-dev#24897 (pandas-dev#24951)"

This reverts commit 84056c5.

* DOC/CLN: Timezone section in timeseries.rst (pandas-dev#24825)

* DOC: Improve timezone documentation in timeseries.rst

* edit some of the examples

* Address review

* DOC: Fix validation type error RT04 (pandas-dev#25107) (pandas-dev#25129)

* Reading a HDF5 created in py2 (pandas-dev#25058)

* BUG: Fixing regression in DataFrame.all and DataFrame.any with bool_only=True (pandas-dev#25102)

* Removal of return variable names (pandas-dev#25123)

* DOC: Improve docstring of Series.mul (pandas-dev#25136)

* TST/REF: collect DataFrame reduction tests (pandas-dev#24914)

* Fix validation error type `SS05` and check in CI  (pandas-dev#25133)

* Fixed tuple to List Conversion in Dataframe class (pandas-dev#25089)

* STY: use pytest.raises context manager (indexes/multi) (pandas-dev#25175)

* DOC: Updates to Timestamp document (pandas-dev#25163)

* BLD: pin cython language level to '2' (pandas-dev#25145)

Not explicitly pinning the language level has been producing future
warnings from cython.  The next release of cython is going to change
the default level to '3str' under which the pandas cython extensions
do not compile.

The long term solution is to update the cython files to the next
language level, but this is a stop-gap to keep pandas building.

* CLN: Use ABCs in set_index (pandas-dev#25128)

* DOC: update docstring for series.nunique (pandas-dev#25116)

* DEPR: remove PanelGroupBy, disable DataFrame.to_panel (pandas-dev#25047)

* BUG: DataFrame.merge(suffixes=) does not respect None (pandas-dev#24819)

* fix MacPython pandas-wheels failure (pandas-dev#25186)

* modernize compat imports (pandas-dev#25192)

* TST: follow-up to Test nested pandas array pandas-dev#24993 (pandas-dev#25155)

* revert changes to tests in pandas-devgh-24993

* Test nested PandasArray

* isort test_numpy.py

* change NP_VERSION_INFO

* use LooseVersion

* add _np_version_under1p16

* remove blank line from merge master

* add doctstrings to fixtures

* DOC/CLN: Fix errors in Series docstrings (pandas-dev#24945)

* REF: Add more pytest idiom to test_holiday.py (pandas-dev#25204)

* DOC: Fix validation type error SA05 (pandas-dev#25208)

Create check for SA05 errors in CI

* BUG: Fix Series.is_unique with single occurrence of NaN (pandas-dev#25182)

* REF: Remove many Panel tests (pandas-dev#25191)

* DOC: Fixes to docstrings and add PR10 (space before colon) to validation (pandas-dev#25109)

* DOC: exclude autogenerated c/cpp/html files from 'trailing whitespace' checks (pandas-dev#24549)

* STY: use pytest.raises context manager (indexes/period) (pandas-dev#25199)

* fix ci failures (pandas-dev#25225)

* DEPR: remove tm.makePanel and all usages (pandas-dev#25231)

* DEPR: Remove Panel-specific parts of io.pytables (pandas-dev#25233)

* DEPR: Add Deprecated warning for timedelta with passed units M and Y  (pandas-dev#23264)

* BUG-25061 fix printing indices with NaNs (pandas-dev#25202)

* BUG: Fix regression in DataFrame.apply causing RecursionError (pandas-dev#25230)

* BUG: Fix regression in DataFrame.apply causing RecursionError

* Add feedback from PR

* Add feedback after further code review

* Add feedback after further code review 2

* BUG: Fix read_json orient='table' without index (pandas-dev#25170) (pandas-dev#25171)

* BLD: prevent asv from calling sys.stdin.close() by using different launch method (pandas-dev#25237)

* (Closes pandas-dev#25029) Removed extra bracket from cheatsheet code example. (pandas-dev#25032)

* CLN: For loops, boolean conditions, misc. (pandas-dev#25206)

* Refactor groupby group_add from tempita to fused types (pandas-dev#24954)

* CLN: Remove ipython 2.x compat (pandas-dev#25150)

* CLN: Remove ipython 2.x compat

* trivial change to trigger asv

* Update v0.25.0.rst

* revert whatsnew

* BUG: Duplicated returns boolean dataframe (pandas-dev#25234)

* REF/TST: resample/test_base.py (pandas-dev#25262)

* Revert "BLD: prevent asv from calling sys.stdin.close() by using different launch method (pandas-dev#25237)" (pandas-dev#25253)

This reverts commit f67b7fd.

* BUG: pandas Timestamp tz_localize and tz_convert do not preserve `freq` attribute (pandas-dev#25247)

* DEPR: remove assert_panel_equal (pandas-dev#25238)

* PR04 errors fix (pandas-dev#25157)

* Split Excel IO Into Sub-Directory (pandas-dev#25153)

* API: Ensure DatetimeTZDtype standardizes pytz timezones (pandas-dev#25254)

* API: Ensure DatetimeTZDtype standardizes pytz timezones

* Add whatsnew

* BUG: Fix exceptions when Series.interpolate's `order` parameter is missing or invalid (pandas-dev#25246)

* BUG: raise accurate exception from Series.interpolate (pandas-dev#24014)

* Actually validate `order` before use in spline

* Remove unnecessary check and dead code

* Clean up comparison/tests based on feedback

* Include invalid order value in exception

* Check for NaN order in spline validation

* Add whatsnew entry for bug fix

* CLN: Make unit tests assert one error at a time

* CLN: break test into distinct test case

* PEP8 fix in test module

* CLN: Test fixture for interpolate methods

* BUG: DataFrame.join on tz-aware DatetimeIndex (pandas-dev#25260)

* REF: use _constructor and ABCFoo to avoid runtime imports (pandas-dev#25272)

* Refactor groupby group_prod, group_var, group_mean, group_ohlc (pandas-dev#25249)

*  Fix typo in Cheat sheet with regex (pandas-dev#25215)

* Edit parameter type in pandas.core.frame.py DataFrame.count (pandas-dev#25198)

* TST/CLN: remove test_slice_ints_with_floats_raises (pandas-dev#25277)

* Removed Panel class from HDF ASVs (pandas-dev#25281)

* DOC: Fix minor typo in docstring (pandas-dev#25285)

* DOC/CLN: Fix errors in DataFrame docstrings (pandas-dev#24952)

* Skipped broken Py2 / Windows test (pandas-dev#25323)

* Rt05 documentation error fix issue 25108 (pandas-dev#25309)

* Fix typos in docs (pandas-dev#25305)

* Doc: corrects spelling in generic.py (pandas-dev#25333)

* BUG: groupby.transform retains timezone information (pandas-dev#25264)

* Fixes Formatting Exception (pandas-dev#25088)

* Bug: OverflowError in resample.agg with tz data (pandas-dev#25297)

* DOC/CLN: Fix various docstring errors (pandas-dev#25295)

* COMPAT: alias .to_numpy() for timestamp and timedelta scalars (pandas-dev#25142)

* ENH: Support times with timezones in at_time (pandas-dev#25280)

* BUG: Fix passing of numeric_only argument for categorical reduce (pandas-dev#25304)

* TST: use a fixed seed to have the same uniques across python versions (pandas-dev#25346)

TST: add pytest-mock to handle mocker fixture

* TST: xfail excel styler tests, xref GH25351 (pandas-dev#25352)

* TST: xfail excel styler tests, xref GH25351

* CI: cleanup .c files for cpplint>1.4

* DOC: Correct doc mistake in combiner func (pandas-dev#25360)

Closes pandas-devgh-25359.

* DOC/BLD: fix --no-api option (pandas-dev#25209)

* DOC: modify typos in Contributing section (pandas-dev#25365)

* Remove spurious MultiIndex creation in `_set_axis_name` (pandas-dev#25371)

* Resovles pandas-dev#25370
* Introduced by pandas-dev#22969

* pandas-dev#23049: test for Fatal Stack Overflow stemming From Misuse of astype('category') (pandas-dev#25366)

* 9236: test for the DataFrame.groupby with MultiIndex having pd.NaT (pandas-dev#25310)

* [BUG] exception handling of MultiIndex.__contains__ too narrow (pandas-dev#25268)

* 14873: test for groupby.agg coercing booleans (pandas-dev#25327)

* BUG/ENH: Timestamp.strptime (pandas-dev#25124)

* BUG: constructor Timestamp.strptime() does not support %z.

* Add doc string to NaT and Timestamp

* updated the error message

* Updated whatsnew entry.

* Interval dtype fix (pandas-dev#25338)

* [CLN] Excel Module Cleanups (pandas-dev#25275)

Closes pandas-devgh-25153

Authored-By: tdamsma <tdamsma@gmail.com>

* ENH: indexing and __getitem__ of dataframe and series accept zerodim integer np.array as int (pandas-dev#24924)

* REGR: fix TimedeltaIndex sum and datetime subtraction with NaT (pandas-dev#25282, pandas-dev#25317) (pandas-dev#25329)

* edited whatsnew typo (pandas-dev#25381)

* fix typo of see also in DataFrame stat funcs (pandas-dev#25388)

* API: more consistent error message for MultiIndex.from_arrays (pandas-dev#25189)

* CLN: (re-)enable infer_dtype to catch complex (pandas-dev#25382)

* DOC: Edited docstring of Interval (pandas-dev#25410)

The docstring contained a repeated segment, which I removed.

* Mark test_pct_max_many_rows as high memory (pandas-dev#25400)

Fixes issue pandas-dev#25384

* Correct a typo of version number for interpolate() (pandas-dev#25418)

* DEP: add pytest-mock to environment.yml (pandas-dev#25417)

* BUG: Fix type coercion in read_json orient='table' (pandas-dev#21345) (pandas-dev#25219)

* ERR: doc update for ParsingError (pandas-dev#25414)

Closes pandas-devgh-22881

* ENH: Add in sort keyword to DatetimeIndex.union (pandas-dev#25110)

* DOC: Rewriting of ParserError doc + minor spacing (pandas-dev#25421)

Follow-up to pandas-devgh-25414.

* API/ERR: allow iterators in df.set_index & improve errors (pandas-dev#24984)

* BUG: Indexing with UTC offset string no longer ignored (pandas-dev#25263)

* PERF/REF: improve performance of Series.searchsorted, PandasArray.searchsorted, collect functionality (pandas-dev#22034)

* TST: remove never-used singleton fixtures (pandas-dev#24885)

* BUG: fixed merging with empty frame containing an Int64 column (pandas-dev#25183) (pandas-dev#25289)

* DOC: fixed geo accessor example in extending.rst (pandas-dev#25420)

I realised "lon" and "lat" had just been switched with "longitude" and "latitude" in the following code block. So I used those names here as well.

* TST: numpy RuntimeWarning with Series.round() (pandas-dev#25432)

* CI: add __init__.py to isort skip list (pandas-dev#25455)

* DOC: CategoricalIndex doc string (pandas-dev#24852)

* DataFrame.drop Raises KeyError definition (pandas-dev#25474)

* BUG: Keep column level name in resample nunique (pandas-dev#25469)

Closes pandas-devgh-23222

xref pandas-devgh-23645

* ERR: Correct error message in to_datetime (pandas-dev#25467)

* ERR: Correct error message in to_datetime

Closes pandas-devgh-23830

xref pandas-devgh-23969

* Fix minor typo (pandas-dev#25458)

Signed-off-by: Philippe Ombredanne <pombredanne@nexb.com>

* CI: Set pytest minversion to 4.0.2 (pandas-dev#25402)

* CI: Set pytest minversion to 4.0.2

* STY: use pytest.raises context manager (indexes) (pandas-dev#25447)

* STY: use pytest.raises context manager (tests/test_*) (pandas-dev#25452)

* STY: use pytest.raises context manager (tests/test_*)

* fix ci failures

* skip py2 ci failure

* Fix minor error in dynamic load function (pandas-dev#25256)

* Cythonized GroupBy Quantile (pandas-dev#20405)

* BUG: Fix regression on DataFrame.replace for regex (pandas-dev#25266)

* BUG: Fix regression on DataFrame.replace for regex

The commit ensures that the replacement for regex is not confined to the 
beginning of the string but spans all the characters within. The 
behaviour is then consistent with versions prior to 0.24.0.

One test has been added to account for character replacement when the 
character is not at the beginning of the string.

* Correct contribution guide docbuild instruction (pandas-dev#25479)

* TST/REF: Add pytest idiom to test_frequencies.py (pandas-dev#25430)

* BUG: Fix index type casting in read_json with orient='table' and float index (pandas-dev#25433) (pandas-dev#25434)

* BUG: Groupby.agg with reduction function with tz aware data (pandas-dev#25308)

* BUG: Groupby.agg cannot reduce with tz aware data

* Handle output always as UTC

* Add whatsnew

* isort and add another fixed groupby.first/last issue

* bring condition at a higher level

* Add try for _try_cast

* Add comments

* Don't pass the utc_dtype explicitly

* Remove unused import

* Use string dtype instead

* DOC: Fix docstring for read_sql_table (pandas-dev#25465)

* ENH: Add Series.str.casefold (pandas-dev#25419)

* Fix PR10 error and Clean up docstrings from functions related to RT05 errors (pandas-dev#25132)

* Fix unreliable test (pandas-dev#25496)

* DOC: Clarifying doc/make.py --single parameter (pandas-dev#25482)

* fix MacPython / pandas-wheels ci failures (pandas-dev#25505)

* DOC: Reword Series.interpolate docstring for clarity (pandas-dev#25491)

* Changed insertion order to sys.path (pandas-dev#25486)

* TST: xfail non-writeable pytables tests with numpy 1.16x (pandas-dev#25517)

* STY: use pytest.raises context manager (arithmetic, arrays, computati… (pandas-dev#25504)

* BUG: Fix RecursionError during IntervalTree construction (pandas-dev#25498)

* STY: use pytest.raises context manager (plotting, reductions, scalar...) (pandas-dev#25483)

* STY: use pytest.raises context manager (plotting, reductions, scalar...)

* revert removed testing in test_timedelta.py

* remove TODO from test_frame.py

* skip py2 ci failure

* BUG: Fix potential segfault after pd.Categorical(pd.Series(...), categories=...) (pandas-dev#25368)

* Make DataFrame.to_html output full content (pandas-dev#24841)

* BUG-16807-1 SparseFrame fills with default_fill_value if data is None (pandas-dev#24842)

Closes pandas-devgh-16807.

* DOC: Add conda uninstall pandas to contributing guide (pandas-dev#25490)

* fix pandas-dev#25487 add modify documentation

* fix segfault when running with cython coverage enabled, xref cython#2879 (pandas-dev#25529)

* TST: inline empty_frame = DataFrame({}) fixture (pandas-dev#24886)

* DOC: Polishing typos out of doc/source/user_guide/indexing.rst (pandas-dev#25528)

* STY: use pytest.raises context manager (frame) (pandas-dev#25516)

* DOC: Fix pandas-dev#24268 by updating description for keep in Series.nlargest (pandas-dev#25358)

* DOC: Fix pandas-dev#24268 by updating description for keep

* fix MacPython / pandas-wheels ci failures (pandas-dev#25537)

*  TST/CLN: Remove more Panel tests (pandas-dev#25550)

* BUG: caught typeError in series.at (pandas-dev#25506) (pandas-dev#25533)

* ENH: Add errors parameter to DataFrame.rename (pandas-dev#25535)

* ENH: GH13473 Add errors parameter to DataFrame.rename

* TST: Skip IntervalTree construction overflow test on 32bit (pandas-dev#25558)

* DOC: Small fixes to 0.24.2 whatsnew (pandas-dev#25559)

* minor typo error (pandas-dev#25574)

* BUG: in error message raised when invalid axis parameter (pandas-dev#25553)

* BLD: Fixed pip install with no numpy (pandas-dev#25568)

* Document the behavior of `axis=None` with `style.background_gradient` (pandas-dev#25551)

* fix minor typos in dsintro.rst (pandas-dev#25579)

* BUG: Handle readonly arrays in period_array (pandas-dev#25556)

* BUG: Handle readonly arrays in period_array

Closes pandas-dev#25403

* DOC: Fix typo in tz_localize (pandas-dev#25598)

* BUG: secondary y axis could not be set to log scale (pandas-dev#25545) (pandas-dev#25586)

* TST: add test for groupby on list of empty list (pandas-dev#25589)

* TYPING: Small fixes to make stubgen happy (pandas-dev#25576)

* CLN: Parmeterize test cases (pandas-dev#25355)
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