Merge pull request #10 from hhaensel/hh/selection

adapt to the type change in `Gen` from `AddressSet` to `Selection`

also change tf calls to use the legacy tf1 api

Manifest.toml

@@ -1,8 +1,10 @@
+# This file is machine-generated - editing it directly is not advised
+
 [[Arpack]]
-deps = ["BinaryProvider", "Libdl", "LinearAlgebra", "Random", "SparseArrays", "Test"]
-git-tree-sha1 = "1ce1ce9984683f0b6a587d5bdbc688ecb480096f"
+deps = ["BinaryProvider", "Libdl", "LinearAlgebra"]
+git-tree-sha1 = "cd64c112638582ba4f0be9c3e20656499c508565"
 uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97"
-version = "0.3.0"
+version = "0.3.2"
 
 [[Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
@@ -14,22 +16,16 @@ uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee"
 version = "0.8.10"
 
 [[BinaryProvider]]
-deps = ["Libdl", "Pkg", "SHA", "Test"]
-git-tree-sha1 = "055eb2690182ebc31087859c3dd8598371d3ef9e"
+deps = ["Libdl", "SHA"]
+git-tree-sha1 = "5b08ed6036d9d3f0ee6369410b830f8873d4024c"
 uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
-version = "0.5.3"
-
-[[CSTParser]]
-deps = ["LibGit2", "Test", "Tokenize"]
-git-tree-sha1 = "437c93bc191cd55957b3f8dee7794b6131997c56"
-uuid = "00ebfdb7-1f24-5e51-bd34-a7502290713f"
-version = "0.5.2"
+version = "0.5.8"
 
 [[ColorTypes]]
-deps = ["FixedPointNumbers", "Random", "Test"]
-git-tree-sha1 = "f73b0e10f2a5756de7019818a41654686da06b09"
+deps = ["FixedPointNumbers", "Random"]
+git-tree-sha1 = "b9de8dc6106e09c79f3f776c27c62360d30e5eb8"
 uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
-version = "0.7.5"
+version = "0.9.1"
 
 [[CommonSubexpressions]]
 deps = ["Test"]
@@ -39,27 +35,32 @@ version = "0.2.0"
 
 [[Compat]]
 deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
-git-tree-sha1 = "84aa74986c5b9b898b0d1acaf3258741ee64754f"
+git-tree-sha1 = "ed2c4abadf84c53d9e58510b5fc48912c2336fbb"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "2.1.0"
+version = "2.2.0"
 
 [[Conda]]
-deps = ["Compat", "JSON", "VersionParsing"]
-git-tree-sha1 = "b625d802587c2150c279a40a646fba63f9bd8187"
+deps = ["JSON", "VersionParsing"]
+git-tree-sha1 = "9a11d428dcdc425072af4aea19ab1e8c3e01c032"
 uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d"
-version = "1.2.0"
+version = "1.3.0"
+
+[[DataAPI]]
+git-tree-sha1 = "674b67f344687a88310213ddfa8a2b3c76cc4252"
+uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
+version = "1.1.0"
 
 [[DataDeps]]
-deps = ["DelimitedFiles", "HTTP", "Reexport", "SHA", "Test"]
-git-tree-sha1 = "446eb89694d774bc55adcfec0ed0f85efda8857f"
+deps = ["HTTP", "Reexport", "SHA"]
+git-tree-sha1 = "795b99df0963831ddeefbe9ac05721ffd9475c04"
 uuid = "124859b0-ceae-595e-8997-d05f6a7a8dfe"
-version = "0.6.2"
+version = "0.7.1"
 
 [[DataStructures]]
-deps = ["InteractiveUtils", "OrderedCollections", "Random", "Serialization", "Test"]
-git-tree-sha1 = "ca971f03e146cf144a9e2f2ce59674f5bf0e8038"
+deps = ["InteractiveUtils", "OrderedCollections"]
+git-tree-sha1 = "b7720de347734f4716d1815b00ce5664ed6bbfd4"
 uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
-version = "0.15.0"
+version = "0.17.9"
 
 [[Dates]]
 deps = ["Printf"]
@@ -70,26 +71,32 @@ deps = ["Mmap"]
 uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"
 
 [[DiffResults]]
-deps = ["Compat", "StaticArrays"]
-git-tree-sha1 = "34a4a1e8be7bc99bc9c611b895b5baf37a80584c"
+deps = ["StaticArrays"]
+git-tree-sha1 = "da24935df8e0c6cf28de340b958f6aac88eaa0cc"
 uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5"
-version = "0.0.4"
+version = "1.0.2"
 
 [[DiffRules]]
-deps = ["Random", "Test"]
-git-tree-sha1 = "dc0869fb2f5b23466b32ea799bd82c76480167f7"
+deps = ["NaNMath", "Random", "SpecialFunctions"]
+git-tree-sha1 = "10dca52cf6d4a62d82528262921daf63b99704a2"
 uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
-version = "0.0.10"
+version = "1.0.0"
 
 [[Distributed]]
-deps = ["LinearAlgebra", "Random", "Serialization", "Sockets"]
+deps = ["Random", "Serialization", "Sockets"]
 uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
 
 [[Distributions]]
-deps = ["Distributed", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
-git-tree-sha1 = "dec0ebacfbc3a2126c614ab5e903c9ef063688d0"
+deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"]
+git-tree-sha1 = "6b19601c0e98de3a8964ed33ad73e130c7165b1d"
 uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
-version = "0.17.0"
+version = "0.22.4"
+
+[[FillArrays]]
+deps = ["LinearAlgebra", "Random", "SparseArrays"]
+git-tree-sha1 = "fec413d4fc547992eb62a5c544cedb6d7853c1f5"
+uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
+version = "0.8.4"
 
 [[FixedPointNumbers]]
 deps = ["Test"]
@@ -98,10 +105,10 @@ uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
 version = "0.5.3"
 
 [[ForwardDiff]]
-deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "InteractiveUtils", "LinearAlgebra", "NaNMath", "Random", "SparseArrays", "SpecialFunctions", "StaticArrays", "Test"]
-git-tree-sha1 = "4c4d727f1b7e0092134fabfab6396b8945c1ea5b"
+deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "NaNMath", "Random", "SpecialFunctions", "StaticArrays"]
+git-tree-sha1 = "88b082d492be6b63f967b6c96b352e25ced1a34c"
 uuid = "f6369f11-7733-5829-9624-2563aa707210"
-version = "0.10.3"
+version = "0.10.9"
 
 [[FunctionWrappers]]
 deps = ["Compat"]
@@ -116,24 +123,24 @@ uuid = "de31a74c-ac4f-5751-b3fd-e18cd04993ca"
 version = "0.5.0"
 
 [[GZip]]
-deps = ["Libdl", "Test"]
-git-tree-sha1 = "ee443ef166b29282301468d8af403e1ed8f5412e"
+deps = ["Libdl"]
+git-tree-sha1 = "039be665faf0b8ae36e089cd694233f5dee3f7d6"
 uuid = "92fee26a-97fe-5a0c-ad85-20a5f3185b63"
-version = "0.5.0"
+version = "0.5.1"
 
 [[Gen]]
-deps = ["DataStructures", "Distributions", "FunctionalCollections", "JSON", "LinearAlgebra", "Random", "ReverseDiff", "SpecialFunctions"]
-git-tree-sha1 = "8ad5405cc1316360a17bf9ebbcc4abbb04484edc"
+deps = ["DataStructures", "Distributions", "FunctionalCollections", "JSON", "LinearAlgebra", "MacroTools", "Random", "ReverseDiff", "SpecialFunctions"]
+git-tree-sha1 = "8b1686eca997088b31541e4a2b92d479bf2de24d"
 repo-rev = "master"
 repo-url = "https://github.com/probcomp/gen"
 uuid = "ea4f424c-a589-11e8-07c0-fd5c91b9da4a"
-version = "0.3.1"
+version = "0.3.2"
 
 [[HTTP]]
-deps = ["Base64", "Dates", "Distributed", "IniFile", "MbedTLS", "Random", "Sockets", "Test"]
-git-tree-sha1 = "25db0e3f27bd5715814ca7e4ad22025fdcf5cc6e"
+deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"]
+git-tree-sha1 = "5c49dab19938b119fe204fd7d7e8e174f4e9c68b"
 uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
-version = "0.8.0"
+version = "0.8.8"
 
 [[IniFile]]
 deps = ["Test"]
@@ -142,14 +149,14 @@ uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f"
 version = "0.5.0"
 
 [[InteractiveUtils]]
-deps = ["LinearAlgebra", "Markdown"]
+deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
 [[JSON]]
-deps = ["Dates", "Distributed", "Mmap", "Sockets", "Test", "Unicode"]
-git-tree-sha1 = "1f7a25b53ec67f5e9422f1f551ee216503f4a0fa"
+deps = ["Dates", "Mmap", "Parsers", "Unicode"]
+git-tree-sha1 = "b34d7cef7b337321e97d22242c3c2b91f476748e"
 uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
-version = "0.20.0"
+version = "0.21.0"
 
 [[LibGit2]]
 uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
@@ -171,10 +178,10 @@ uuid = "eb30cadb-4394-5ae3-aed4-317e484a6458"
 version = "0.3.0"
 
 [[MacroTools]]
-deps = ["CSTParser", "Compat", "DataStructures", "Test"]
-git-tree-sha1 = "daecd9e452f38297c686eba90dba2a6d5da52162"
+deps = ["DataStructures", "Markdown", "Random"]
+git-tree-sha1 = "07ee65e03e28ca88bc9a338a3726ae0c3efaa94b"
 uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
-version = "0.5.0"
+version = "0.5.4"
 
 [[Markdown]]
 deps = ["Base64"]
@@ -187,31 +194,36 @@ uuid = "739be429-bea8-5141-9913-cc70e7f3736d"
 version = "0.6.8"
 
 [[Missings]]
-deps = ["Dates", "InteractiveUtils", "SparseArrays", "Test"]
-git-tree-sha1 = "d1d2585677f2bd93a97cfeb8faa7a0de0f982042"
+deps = ["DataAPI"]
+git-tree-sha1 = "de0a5ce9e5289f27df672ffabef4d1e5861247d5"
 uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
-version = "0.4.0"
+version = "0.4.3"
 
 [[Mmap]]
 uuid = "a63ad114-7e13-5084-954f-fe012c677804"
 
 [[NaNMath]]
-deps = ["Compat"]
-git-tree-sha1 = "ce3b85e484a5d4c71dd5316215069311135fa9f2"
+git-tree-sha1 = "928b8ca9b2791081dc71a51c55347c27c618760f"
 uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
-version = "0.3.2"
+version = "0.3.3"
 
 [[OrderedCollections]]
 deps = ["Random", "Serialization", "Test"]
-git-tree-sha1 = "85619a3f3e17bb4761fe1b1fd47f0e979f964d5b"
+git-tree-sha1 = "c4c13474d23c60d20a67b217f1d7f22a40edf8f1"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
-version = "1.0.2"
+version = "1.1.0"
 
 [[PDMats]]
 deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"]
-git-tree-sha1 = "b6c91fc0ab970c0563cbbe69af18d741a49ce551"
+git-tree-sha1 = "5f303510529486bb02ac4d70da8295da38302194"
 uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
-version = "0.9.6"
+version = "0.9.11"
+
+[[Parsers]]
+deps = ["Dates", "Test"]
+git-tree-sha1 = "d112c19ccca00924d5d3a38b11ae2b4b268dda39"
+uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
+version = "0.3.11"
 
 [[Pkg]]
 deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
@@ -228,10 +240,10 @@ uuid = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
 version = "1.91.2"
 
 [[QuadGK]]
-deps = ["DataStructures", "LinearAlgebra", "Test"]
-git-tree-sha1 = "3ce467a8e76c6030d4c3786e7d3a73442017cdc0"
+deps = ["DataStructures", "LinearAlgebra"]
+git-tree-sha1 = "dc84e810393cfc6294248c9032a9cdacc14a3db4"
 uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
-version = "2.0.3"
+version = "2.3.1"
 
 [[REPL]]
 deps = ["InteractiveUtils", "Markdown", "Sockets"]
@@ -254,16 +266,16 @@ uuid = "ae029012-a4dd-5104-9daa-d747884805df"
 version = "0.5.2"
 
 [[ReverseDiff]]
-deps = ["DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics", "Test"]
-git-tree-sha1 = "d44e80d815a1a5abaf1ff1def21bb629cabaffec"
+deps = ["DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"]
+git-tree-sha1 = "6a5aae862f93c577f89a607334f09630439ec119"
 uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
-version = "0.3.1"
+version = "1.0.0"
 
 [[Rmath]]
-deps = ["BinaryProvider", "Libdl", "Random", "Statistics", "Test"]
-git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9"
+deps = ["BinaryProvider", "Libdl", "Random", "Statistics"]
+git-tree-sha1 = "2bbddcb984a1d08612d0c4abb5b4774883f6fa98"
 uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
-version = "0.5.0"
+version = "0.6.0"
 
 [[SHA]]
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
@@ -289,32 +301,32 @@ deps = ["LinearAlgebra", "Random"]
 uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
 
 [[SpecialFunctions]]
-deps = ["BinDeps", "BinaryProvider", "Libdl", "Test"]
-git-tree-sha1 = "0b45dc2e45ed77f445617b99ff2adf0f5b0f23ea"
+deps = ["BinDeps", "BinaryProvider", "Libdl"]
+git-tree-sha1 = "3bdd374b6fd78faf0119b8c5d538788dbf910c6e"
 uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
-version = "0.7.2"
+version = "0.8.0"
 
 [[StaticArrays]]
-deps = ["InteractiveUtils", "LinearAlgebra", "Random", "Statistics", "Test"]
-git-tree-sha1 = "3841b39ed5f047db1162627bf5f80a9cd3e39ae2"
+deps = ["LinearAlgebra", "Random", "Statistics"]
+git-tree-sha1 = "5a3bcb6233adabde68ebc97be66e95dcb787424c"
 uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "0.10.3"
+version = "0.12.1"
 
 [[Statistics]]
 deps = ["LinearAlgebra", "SparseArrays"]
 uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 
 [[StatsBase]]
-deps = ["DataStructures", "DelimitedFiles", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "Test"]
-git-tree-sha1 = "435707791dc85a67d98d671c1c3fcf1b20b00f94"
+deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics"]
+git-tree-sha1 = "c53e809e63fe5cf5de13632090bc3520649c9950"
 uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
-version = "0.29.0"
+version = "0.32.0"
 
 [[StatsFuns]]
-deps = ["Rmath", "SpecialFunctions", "Test"]
-git-tree-sha1 = "b3a4e86aa13c732b8a8c0ba0c3d3264f55e6bb3e"
+deps = ["Rmath", "SpecialFunctions"]
+git-tree-sha1 = "79982835d2ff3970685cb704500909c94189bde9"
 uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
-version = "0.8.0"
+version = "0.9.3"
 
 [[SuiteSparse]]
 deps = ["Libdl", "LinearAlgebra", "SparseArrays"]
@@ -324,27 +336,20 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"
 deps = ["Distributed", "InteractiveUtils", "Logging", "Random"]
 uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
-[[Tokenize]]
-deps = ["Printf", "Test"]
-git-tree-sha1 = "3e83f60b74911d3042d3550884ca2776386a02b8"
-uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
-version = "0.5.3"
-
 [[URIParser]]
 deps = ["Test", "Unicode"]
 git-tree-sha1 = "6ddf8244220dfda2f17539fa8c9de20d6c575b69"
 uuid = "30578b45-9adc-5946-b283-645ec420af67"
 version = "0.4.0"
 
 [[UUIDs]]
-deps = ["Random"]
+deps = ["Random", "SHA"]
 uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
 
 [[Unicode]]
 uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
 
 [[VersionParsing]]
-deps = ["Compat"]
-git-tree-sha1 = "c9d5aa108588b978bd859554660c8a5c4f2f7669"
+git-tree-sha1 = "80229be1f670524750d905f8fc8148e5a8c4537f"
 uuid = "81def892-9a0e-5fdd-b105-ffc91e053289"
-version = "1.1.3"
+version = "1.2.0"

Project.toml

@@ -11,5 +11,5 @@ PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
 [extras]
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
-[targets]   	
+[targets]
 test = ["Test"]