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Merge upstream changes #1

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wants to merge 315 commits into from
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Merge upstream changes #1

wants to merge 315 commits into from

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Reference Issues/PRs

What does this implement/fix? Explain your changes.

Any other comments?

lesteve and others added 30 commits February 8, 2024 18:54
@lesteve @ogrisel
CI Use environment variable to turn warnings into errors in tests and…
ad3addd 
… doc build (scikit-learn#28372)

Co-authored-by: Olivier Grisel <olivier.grisel@ensta.org>
@Charlie-XIAO
MAINT remove unneeded robots.txt (scikit-learn#28387)
d54d7a2
@lesteve
FIX HistgradientBoosting with pandas extension dtypes (scikit-learn#2…
569ed5e 
…8385)
@Choudhry-Shaharyar
DOC: Improved clarity and structure of Support documentation (scikit-…
d2108a3 
…learn#28292)
@eddiebergman @glemaitre
FIX handle dataframe in ARDRegression when predict requests std. dev. (…
9c29816 
…scikit-learn#28377)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
@bmgdc @glemaitre
DOC add interval range for parameter of SGDRegressor (scikit-learn#28373
724768e 
)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
@ogrisel
ENH use check_finite=False when calling scipy.linalg functions in ran…
7f1d4d0 
…domized_range_finder (scikit-learn#27537)
@glemaitre
FIX raise proper error for not supporting multilabel in VotingClassif…
52943b7 
…ier (scikit-learn#27702)
@rprkh
DOC added example for `sklearn.datasets.make_multilabel_classificatio…
9323e07 
…n` (scikit-learn#28354)
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for main CI build(s) 🔒 🤖 (scikit-learn#28405)
c354424 
Co-authored-by: Lock file bot <noreply@github.com>
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for pypy CI build(s) 🔒 🤖 (scikit-learn#28404)
8f1931d 
Co-authored-by: Lock file bot <noreply@github.com>
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for cirrus-arm CI build(s) 🔒 🤖 (scikit-learn…
760f85b 
…#28403)

Co-authored-by: Lock file bot <noreply@github.com>
@ogrisel @betatim @lorentzenchr
DOC Update the FAQ entry on GPU support (scikit-learn#28328)
3f7659c 
Co-authored-by: Tim Head <betatim@gmail.com>
Co-authored-by: Christian Lorentzen <lorentzen.ch@gmail.com>
@lorentzenchr
ENH use memset for histograms in HGBT (scikit-learn#28398)
c47205f
@ChVeen @glemaitre
DOC added example for sklearn.feature_extraction.image.grid_to_graph (
e845a71 
scikit-learn#28390)

Co-authored-by: Guillaume Lemaitre <guillaume@probabl.ai>
@adam2392 @glemaitre @lesteve
FIX handle properly missing value in MSE and Friedman-MSE `children_i…
ba59a17 
…mpurity` (scikit-learn#28327)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
Co-authored-by: Loïc Estève <loic.esteve@ymail.com>
@eddiebergman
FIX EmptyRequest.get defaults to Bunch of METHODS (scikit-learn…
3b32067 
…#28371)
@StefanieSenger @glemaitre @adrinjalali
MNT Checking function _estimator_has also raises AttributeError (s…
9a6e6dd 
…cikit-learn#28167)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
@StefanieSenger
ENH Add metadata routing for IterativeImputer (scikit-learn#28187)
be35d8c
@glemaitre
DOC update changelog for 1.4.1 release (scikit-learn#28413)
9846576
@LeoGrin @glemaitre @lesteve
FIX handle inconsistence between fill_value and X dtype in `Simpl…
29b14ae 
…eImputer` (scikit-learn#28365)

Co-authored-by: Guillaume Lemaitre <guillaume@probabl.ai>
Co-authored-by: Loïc Estève <loic.esteve@ymail.com>
@glemaitre
MAINT reflect that we move the macos-arm64 to github actions (scikit-…
9ef620b 
…learn#28418)
@lesteve
CI Unpin numpy in no-OpenMP build (scikit-learn#28412)
77429d7
@linus-md
DOC: Added drop down menus to 1.17 Neural Networks (supervised) (sc…
7cfcdbc 
…ikit-learn#27920)
@linus-md
DOC: Added drop down menus to 1.6 Nearest Neighbors (scikit-learn#2…
d196b39 
…7919)
@yuanx749
DOC correct Xy shape in lars_path and lars_path_gram (scikit-lear…
ed76f01 
…n#28419)
@StefanieSenger @betatim @OmarManzoor
DOC Improve User Guide for metadata routing (scikit-learn#27282)
206c434 
Co-authored-by: Tim Head <betatim@gmail.com>
Co-authored-by: Omar Salman <omar.salman@arbisoft.com>
@adam2392
DOC Fix typos in doc of metadata requesting (scikit-learn#28424)
9172779 
Signed-off-by: Adam Li <adam2392@gmail.com>
@lesteve
CI Use Python 3.12 in scipy-dev (scikit-learn#28383)
50e8749
@lesteve
MAINT Update Pyodide version to 0.25.0 (scikit-learn#28420)
7d59402
xuefeng-xu and others added 28 commits March 28, 2024 07:28
@xuefeng-xu @jeremiedbb
ENH Improve the efficiency of QuantileTransformer (scikit-learn#27344)
c63b21e 
Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
@davidleon123
API deprecate Y in favor of y in the PLS module (scikit-learn#28604)
90df49c
@jeremiedbb
MAINT cleanup utils.__init__: move _print_elapsed_time into dedicated…
b599f82 
… submodule (scikit-learn#28662)
@jeremiedbb @glemaitre
MAINT cleanup utils.__init__: move _to_object_array into utils.valida…
9926887 
…tion (scikit-learn#28661)

Co-authored-by: Guillaume Lemaitre <guillaume@probabl.ai>
@lesteve
DOC Remove mention of editing pyproject.toml in Meson doc (scikit-lea…
5033adf 
…rn#28716)
@adam2392
Merge branch 'main' into nconstantv2
3adaecb
@lesteve
TST Speed-up test_configure: avoid cythonizing (scikit-learn#28708)
bdf857a
@lesteve
CI Run only common tests for PyPy (scikit-learn#28704)
f59c503
@adam2392
Merge branch 'main' into submodulev3
6329331
@adam2392
Merge branch 'main' into nconstantv2
0762bc4
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for pypy CI build(s) 🔒 🤖 (scikit-learn#28735)
98a6fb0 
Co-authored-by: Lock file bot <noreply@github.com>
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for scipy-dev CI build(s) 🔒 🤖 (scikit-learn#…
99387f1 
…28736)

Co-authored-by: Lock file bot <noreply@github.com>
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for cirrus-arm CI build(s) 🔒 🤖 (scikit-learn…
e8f8e85 
…#28737)

Co-authored-by: Lock file bot <noreply@github.com>
@scikit-learn-bot @web-flow
🔒 🤖 CI Update lock files for main CI build(s) 🔒 🤖 (scikit-learn#28738)
342a7ef 
Co-authored-by: Lock file bot <noreply@github.com>
@adam2392
Address thomas comments' -s
82c9428 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Merge branch 'nconstantv2' of https://github.com/adam2392/scikit-learn …
7bc919e 
…into nconstantv2
@miguelcsilva @lesteve
DOC Add polars to the requirements for building documentation (scikit…
65ba91b 
…-learn#28724)

Co-authored-by: Loïc Estève <loic.esteve@ymail.com>
@lucyleeow
DOC Fix typo LogisticRegressionCV docstring (scikit-learn#28746)
0e19a48
@adam2392
Merge branch 'main' into submodulev3
3ce53ec
@adam2392
Revert to unit32_t
b2dfe8f 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Fix build
9ea8e67 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
UPdate submodule commit and remove extraneous code
d90befc 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Fixing LOC
a52ec74 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Fix update tree node
750573c 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Fix ci
ec66190 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Fix ci
f360749 
Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
MAINT Fix builder partial fit (neurodata#62)
e020253 
#### Reference Issues/PRs
Fixes state of builder_ to not need to be maintained.

Prolly needs unit-tests to determine if this "functions as desired".
I.e.
- changing datatype of X over multiple partial fits should fail nicely, 
- changing datatype of y
- classification and regression

#### What does this implement/fix? Explain your changes.


#### Any other comments?


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---------

Signed-off-by: Adam Li <adam2392@gmail.com>
@adam2392
Try again for partial fit
775f0b7 
Signed-off-by: Adam Li <adam2392@gmail.com>
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