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70 Open 31 Closed
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Issues list

Segmentation fault after initializing SAM reader
#107 opened Sep 1, 2023 by littmanr16
2
Required depth for WGS
#106 opened Aug 18, 2023 by daccachejoe
The demuxlet is running too slowly.
#105 opened Aug 11, 2023 by baibing0211
1
How to use microarray SNP data as reference genotypes in demuxlet?
#104 opened Jul 20, 2023 by josemovi
how to calculate raw reads count number for each genotype for a droplet.
#103 opened Jul 7, 2023 by mihuzx
SAM/BAM/CRAM file has 1 before 10, but VCF/BCF file has 1 after 10
#102 opened Apr 24, 2023 by WernaUVenema
7
install demuxlet
#101 opened Apr 17, 2023 by Gh-Genetics
1
arrays for snp detection
#100 opened Apr 16, 2023 by guillemsanchezsanchez1996
demuxlet output first row is not contain the barcode information
#99 opened Nov 21, 2022 by cacaonib
1
Using single-nuclear samples
#97 opened Oct 8, 2022 by learning-MD
Different Genotype arrays for demultiplexing samples
#96 opened Oct 5, 2022 by carolynmcgrail
1
Getting number of SNPs and SNP IDs used to assign each cell
#95 opened Aug 1, 2022 by erosix
1
Is there any example using demuxlet with scRNA-seq platforms other than 10x?
#94 opened Jul 18, 2022 by kohjy2000
1
Crash due to std::bad_alloc
#93 opened Jun 10, 2022 by SingulomicsBioinformatics
WARNING: Cannot find AF field from INFO field in VCF file, now calculate AF from AC/AN. Segmentation fault
#92 opened May 30, 2022 by changostraw
2
VCF file read bug
#91 opened Mar 14, 2022 by BanafshehKhaki
2
The total number of pass-filtered reads is too less
#90 opened Feb 22, 2022 by Moxsf
11
installation issues
#89 opened Feb 18, 2022 by lo2811
Explictly warn/fail when an indel is encountered
#84 opened Jan 20, 2021 by nh13
3
Identify sex (contig ploidy) of samples
#83 opened Jan 20, 2021 by nh13
Demuxlet Output Questions
#82 opened Jan 8, 2021 by nh13
2
installation problems
#79 opened Dec 9, 2020 by jjenny
8
installation issue
#78 opened Dec 7, 2020 by cjhong
2
demultiplex mixture of genotyped and non-genotyped samples
#77 opened Dec 3, 2020 by notimenocall
Test Run on Seqwell Datasets
#76 opened Nov 23, 2020 by angelussong
2
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