Add layout render #56
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: BuildAntimony | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| pull_request: | |
| branches: | |
| - '**' | |
| jobs: | |
| build_on_OSs: | |
| name: Build Antimony on ${{ matrix.platform.name }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: | |
| - name: macos-12-release | |
| os_type: macos | |
| os_name: macos-12 | |
| build_type: Release | |
| build_python: ON | |
| build_qt_antimony: ON | |
| - name: macos-12-debug | |
| os_type: macos | |
| os_name: macos-12 | |
| build_type: Debug | |
| build_python: ON | |
| build_qt_antimony: ON | |
| - name: macos-14-release | |
| os_type: macos | |
| os_name: macos-14 | |
| build_type: Release | |
| build_python: ON | |
| build_qt_antimony: OFF | |
| - name: macos-14-debug | |
| os_type: macos | |
| os_name: macos-14 | |
| build_type: Debug | |
| build_python: ON | |
| build_qt_antimony: OFF | |
| - name: ubuntu-latest-release | |
| os_type: ubuntu | |
| os_name: ubuntu-latest | |
| build_type: Release | |
| build_python: ON | |
| build_qt_antimony: ON | |
| - name: ubuntu-latest-debug | |
| os_type: ubuntu | |
| os_name: ubuntu-latest | |
| build_type: Debug | |
| build_python: ON | |
| build_qt_antimony: ON | |
| - name: windows-latest-release | |
| os_type: windows | |
| os_name: windows-latest | |
| expat_lib_name: libexpatmd.lib | |
| build_type: Release | |
| build_python: ON | |
| build_qt_antimony: ON | |
| - name: windows-latest-debug | |
| os_type: windows | |
| os_name: windows-latest | |
| expat_lib_name: libexpatdMD.lib | |
| build_type: Debug | |
| build_python: OFF | |
| build_qt_antimony: ON | |
| - name: manylinux_2_28-release | |
| os_type: manylinux | |
| os_name: ubuntu-latest | |
| container_image: quay.io/pypa/manylinux_2_28_x86_64 | |
| build_type: Release | |
| build_python: ON | |
| build_qt_antimony: OFF | |
| - name: manylinux_2_28-debug | |
| os_type: manylinux | |
| os_name: ubuntu-latest | |
| container_image: quay.io/pypa/manylinux_2_28_x86_64 | |
| build_type: Debug | |
| build_python: ON | |
| build_qt_antimony: OFF | |
| libroadrunner_deps_owner: [ "sys-bio" ] | |
| libroadrunner_deps_repo: [ "libroadrunner-deps" ] | |
| libroadrunner_deps_name: [ "libroadrunner-deps" ] | |
| libroadrunner_deps_release_version: [ "v2.2.5" ] | |
| python_version: [ "3.12" ] | |
| runs-on: ${{ matrix.platform.os_name }} | |
| container: | |
| image: ${{ matrix.platform.container_image || '' }} | |
| steps: | |
| - name: Checkout Antimony | |
| uses: actions/checkout@v4 | |
| - name: Set MSVC as the default compiler on Windows | |
| if: matrix.platform.os_type == 'windows' | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Upgrade gcc on Linux | |
| if: matrix.platform.os_type == 'manylinux' | |
| shell: bash | |
| run: | | |
| if [ "${{ matrix.platform.os_type }}" == 'ubuntu' ]; then | |
| apt-get update | |
| apt-get install -y software-properties-common | |
| add-apt-repository -y ppa:ubuntu-toolchain-r/test | |
| apt-get update | |
| apt-get install -y gcc-11 g++-11 | |
| update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-11 90 | |
| update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-11 90 | |
| elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| dnf install -y gcc-toolset-11 | |
| scl enable gcc-toolset-11 bash | |
| echo "/opt/rh/gcc-toolset-11/root/usr/bin" >> "${GITHUB_PATH}" | |
| fi | |
| - name: Setup Ninja | |
| uses: seanmiddleditch/gha-setup-ninja@v5 | |
| - name: Get Host Architecture | |
| shell: bash | |
| run: | | |
| architecture=$(uname -m) | |
| echo "host_architecture=$architecture" >> "${GITHUB_ENV}" | |
| if [ "${{ matrix.platform.os_type }}" == 'macos' ]; then | |
| echo "OSX_ARCHITECTURES=$architecture" >> "${GITHUB_ENV}" | |
| fi | |
| - name: Install ccache | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| if [ "${{ matrix.platform.os_type }}" == 'macos' ]; then | |
| brew install ccache | |
| elif [ "${{ matrix.platform.os_type }}" == 'ubuntu' ]; then | |
| sudo apt-get update | |
| sudo apt-get install -y ccache | |
| elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| mkdir -p ccache | |
| cd ccache | |
| curl -L https://github.com/ccache/ccache/releases/download/v4.9.1/ccache-4.9.1.tar.gz > ccache.tar.gz | |
| tar -zxf ccache.tar.gz | |
| rm ccache.tar.gz | |
| mkdir -p build-ccache | |
| mkdir -p install-ccache | |
| cd build-ccache | |
| cmake -DCMAKE_INSTALL_PREFIX="$RUNNER_WORKSPACE/ccache/install-ccache" -DCMAKE_BUILD_TYPE=Release ../ccache-4.9.1 | |
| cmake --build . --target install | |
| echo "$RUNNER_WORKSPACE/ccache/install-ccache/bin" >> $GITHUB_PATH | |
| fi | |
| - name: Prepare ccache timestamp on non-Windows platforms | |
| if: matrix.platform.os_type != 'windows' | |
| id: ccache_cache_timestamp | |
| shell: cmake -P {0} | |
| run: | | |
| string(TIMESTAMP current_date "%Y-%m-%d-%H;%M;%S" UTC) | |
| message("timestamp=${current_date}" >> $GITHUB_OUTPUT) | |
| - name: Set ccache cache directory on non-Windows | |
| if: matrix.platform.os_type != 'windows' | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| echo "CCACHE_DIR=${RUNNER_WORKSPACE}/.ccache" >> "${GITHUB_ENV}" | |
| echo "COMPILER_LAUNCHER=ccache" >> "${GITHUB_ENV}" | |
| - name: Cache ccache files on non-Windows | |
| if: matrix.platform.os_type != 'windows' | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${RUNNER_WORKSPACE}/.ccache | |
| key: | |
| ${{ runner.os }}-${{ steps.ccache_cache_timestamp.outputs.timestamp | |
| }} | |
| restore-keys: | | |
| ${{ runner.os }}-${{ steps.ccache_cache_timestamp.outputs.timestamp }} | |
| ${{ runner.os }}- | |
| - name: Setup Python for non-Manylinux platforms | |
| if: matrix.platform.build_python == 'ON' && matrix.platform.os_type != 'manylinux' | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python_version }} | |
| - name: Setup Python for Manylinux platforms | |
| if: matrix.platform.build_python == 'ON' && matrix.platform.os_type == 'manylinux' | |
| shell: bash | |
| run: | | |
| dnf install -y wget | |
| wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh | |
| bash Miniconda3-latest-Linux-x86_64.sh -b -p /Miniconda3 | |
| /Miniconda3/bin/conda create -y --name py3 python=${{ matrix.python_version }} | |
| /Miniconda3/bin/conda init && bash ~/.bashrc && . ~/.bashrc cd ${RUNNER_WORKSPACE} | |
| # sed -i 's/PKG_CONFIG openssl /PKG_CONFIG openssl11 /g' configure | |
| echo "python_exe=/Miniconda3/envs/py3/bin/python" >> $GITHUB_ENV | |
| echo "python_dir=/Miniconda3/envs/py3" >> $GITHUB_ENV | |
| - name: Save Python executable for Windows | |
| if: matrix.platform.build_python == 'ON' && matrix.platform.os_type == 'windows' | |
| run: | | |
| cd ${{ env.pythonLocation }} | |
| $pattern = '[\\]' | |
| $pythonWinExecutable = "${{env.pythonLocation }}" -replace $pattern, '/' | |
| echo "python_exe=$pythonWinExecutable/python.exe" | Out-File -FilePath $env:GITHUB_ENV -Append | |
| echo "python_v1_dir=$pythonWinExecutable" | Out-File -FilePath $env:GITHUB_ENV -Append | |
| - name: Download dependencies binaries | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| mkdir -p ${{ matrix.libroadrunner_deps_name }}-binaries | |
| cd ${{ matrix.libroadrunner_deps_name }}-binaries | |
| if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then | |
| compiler_version=$(ls "C:\Program Files\Microsoft Visual Studio") | |
| binary_file_name=${{ matrix.libroadrunner_deps_name }}-${{ matrix.platform.os_type }}-msvc${compiler_version}-${host_architecture}-${{ matrix.platform.build_type }} | |
| elif [ "${{ matrix.platform.os_type }}" == 'macos' ]; then | |
| os_version=$(sw_vers -productVersion | cut -d '.' -f 1) | |
| binary_file_name=${{ matrix.libroadrunner_deps_name }}-${{ matrix.platform.os_type }}-${os_version}-${host_architecture}-${{ matrix.platform.build_type }} | |
| elif [ "${{ matrix.platform.os_type }}" == 'ubuntu' ]; then | |
| os_version=$(lsb_release -rs | cut -d '.' -f 1) | |
| binary_file_name=${{ matrix.libroadrunner_deps_name }}-${{ matrix.platform.os_type }}-${os_version}-${host_architecture}-${{ matrix.platform.build_type }} | |
| elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| os_name="${{ matrix.platform.name }}" | |
| os_name_without_build_type="${os_name%%-*}" | |
| binary_file_name=${{ matrix.libroadrunner_deps_name }}-${os_name_without_build_type}-${host_architecture}-${{ matrix.platform.build_type }} | |
| fi | |
| curl -LO "https://github.com/${{ matrix.libroadrunner_deps_owner }}/${{ matrix.libroadrunner_deps_repo }}/releases/download/${{ matrix.libroadrunner_deps_release_version }}/$binary_file_name.zip" | |
| unzip -q $binary_file_name.zip | |
| rm $binary_file_name.zip | |
| echo LIBSBML_INSTALL_DIR="-DLIBSBML_INSTALL_DIR=${RUNNER_WORKSPACE}/${{ matrix.libroadrunner_deps_name }}-binaries" >> "${GITHUB_ENV}" | |
| if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then | |
| echo EXPAT_LIBRARY="-DEXPAT_LIBRARY=${RUNNER_WORKSPACE}/${{ matrix.libroadrunner_deps_name }}-binaries/lib/${{ matrix.platform.expat_lib_name }}" >> "${GITHUB_ENV}" | |
| fi | |
| - name: Install libcheck | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| mkdir -p check | |
| cd check | |
| if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then | |
| curl -L https://github.com/sys-bio/antimony/releases/download/libcheck/check-${{ matrix.platform.build_type }}.zip > check.zip | |
| unzip -q check.zip -d check | |
| rm check.zip | |
| echo LIBCHECK_INCLUDE_DIR="-DLIBCHECK_INCLUDE_DIR=${RUNNER_WORKSPACE}/check/check/include" >> "${GITHUB_ENV}" | |
| echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/check/lib/libcheck.lib" >> "${GITHUB_ENV}" | |
| else | |
| curl -L https://github.com/libcheck/check/releases/download/0.15.2/check-0.15.2.tar.gz > check.tar.gz | |
| tar -zxf check.tar.gz | |
| rm check.tar.gz | |
| mkdir -p build-check | |
| mkdir -p install-check | |
| cd build-check | |
| cmake -G "Ninja" -DCMAKE_INSTALL_PREFIX="${RUNNER_WORKSPACE}/check/install-check" -DCMAKE_BUILD_TYPE=Release -DCMAKE_OSX_ARCHITECTURES=${{ matrix.platform.arch }} ../check-0.15.2 | |
| cmake --build . --target install | |
| echo LIBCHECK_INCLUDE_DIR="-DLIBCHECK_INCLUDE_DIR=${RUNNER_WORKSPACE}/check/install-check/include" >> "${GITHUB_ENV}" | |
| if [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/install-check/lib64/libcheck.so" >> "${GITHUB_ENV}" | |
| else | |
| echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/install-check/lib/libcheck.a" >> "${GITHUB_ENV}" | |
| fi | |
| fi | |
| - name: Install Qt | |
| if : matrix.platform.build_qt_antimony == 'ON' | |
| uses: jurplel/install-qt-action@v3 | |
| with: | |
| version: '5.15.2' | |
| - name: Create build directory | |
| shell: bash | |
| run: mkdir -p ${RUNNER_WORKSPACE}/build-antimony | |
| - name: Configure CMake for Antimony | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE}/build-antimony | |
| cmake $GITHUB_WORKSPACE \ | |
| -G "Ninja" \ | |
| -DCMAKE_C_COMPILER_LAUNCHER=${COMPILER_LAUNCHER} \ | |
| -DCMAKE_CXX_COMPILER_LAUNCHER=${COMPILER_LAUNCHER} \ | |
| -DCMAKE_BUILD_TYPE=${{ matrix.platform.build_type }} \ | |
| -DUSE_UNIVERSAL_BINARIES=OFF \ | |
| -DCMAKE_OSX_ARCHITECTURES=${{ matrix.platform.arch }} \ | |
| -DCMAKE_INSTALL_PREFIX="${RUNNER_WORKSPACE}/install-antimony" \ | |
| -DWITH_STATIC_SBML=ON \ | |
| ${LIBSBML_INSTALL_DIR} \ | |
| -DWITH_QTANTIMONY=${{ matrix.platform.build_qt_antimony }} \ | |
| -DWITH_LIBSBML_EXPAT=ON \ | |
| ${EXPAT_LIBRARY} \ | |
| -DWITH_LIBSBML_LIBXML=OFF \ | |
| -DWITH_CHECK=ON \ | |
| ${LIBCHECK_INCLUDE_DIR} \ | |
| ${LIBCHECK_LIBRARY} \ | |
| -DWITH_PYTHON=${{ matrix.platform.build_python }} | |
| - name: Build and install Antimony | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE}/build-antimony | |
| cmake --build . --target install --config ${{ matrix.platform.build_type }} | |
| - name: Run Antimony tests | |
| if : matrix.platform.build_type == 'Release' | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE}/build-antimony | |
| ctest -C ${{ matrix.platform.build_type }} --output-on-failure --verbose --extra-verbose --progress | |
| - name: Set artifacts path and name | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| echo "artifacts_name=antimony-${{ matrix.platform.name }}" >> "${GITHUB_ENV}" | |
| # we need to use relative path as actions/upload-artifact@v1 cannot find it on containerized runners | |
| echo "artifacts_path=${RUNNER_WORKSPACE}/install-antimony" >> "${GITHUB_ENV}" | |
| - name: Upload Antimony binaries | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ${{env.artifacts_name}} | |
| path: ${{env.artifacts_path}} | |
| - name: Create Python wheel artifacts | |
| if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON' | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE}/install-antimony/bindings/python | |
| if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then | |
| ${{env.python_exe}} -m pip install setuptools wheel | |
| ${{env.python_exe}} setup.py bdist_wheel | |
| elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| python${{ matrix.python_version }} -m pip install --trusted-host pypi.org --trusted-host pypi.python.org --trusted-host files.pythonhosted.org setuptools wheel | |
| python${{ matrix.python_version }} setup.py bdist_wheel | |
| else | |
| python${{ matrix.python_version }} -m pip install setuptools wheel | |
| python${{ matrix.python_version }} setup.py bdist_wheel | |
| fi | |
| - name: Rename Python wheel artifacts | |
| if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON' | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE}/install-antimony/bindings/python/dist | |
| if [ "${{ matrix.platform.os_type }}" == 'macos' ]; then | |
| mv antimony*.whl $(echo antimony*.whl | sed "s/universal2/${host_architecture}/g") | |
| elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then | |
| mv antimony*.whl $(echo antimony*.whl | sed "s/linux/manylinux_2_28/g") | |
| elif [ "${{ matrix.platform.os_type }}" == 'ubuntu' ]; then | |
| mv antimony*.whl $(echo antimony*.whl | sed "s/linux/ubuntu/g") | |
| fi | |
| python_version_number=$(echo "${{ matrix.python_version }}" | tr -d '.') | |
| mv antimony*.whl $(echo antimony*.whl | sed "s/cp${python_version_number}-cp${python_version_number}/py3-none/g") | |
| - name: Set Python wheel artifacts path and name | |
| if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON' | |
| shell: bash | |
| run: | | |
| cd ${RUNNER_WORKSPACE} | |
| python_wheel_file_name=$(ls install-antimony/bindings/python/dist | grep '^antimony') | |
| echo "python_wheel_artifacts_name=${python_wheel_file_name}" >> "${GITHUB_ENV}" | |
| echo "python_wheel_artifacts_file=${RUNNER_WORKSPACE}/install-antimony/bindings/python/dist/$python_wheel_file_name" >> "${GITHUB_ENV}" | |
| - name: Upload Python wheel artifacts | |
| if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ${{env.python_wheel_artifacts_name}} | |
| path: ${{env.python_wheel_artifacts_file}} |