showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
An automated method to map yeast variants to proteins modifications and functional regions
Estimate PTM hotspots in protein sequence alignments
MetaDome is aimed at professionals in the (bio-)medical field of human genetics who wish to visualize the position of their mutation of interest in the context of general population-based genetic variation and provide detailed information of pathogenic variants found across homologous domain positions.
Automated analysis tool for mutations in promoters, transcription factor binding sites, coding regions and protein domains in the context of gene regulatory networks.
FAS - Tool for Feature Architecture Similarity calculation
A Bio2BEL package for converting InterPro to BEL
Brivez is a bioinformatic tool thought as Quality of Life's improvement, providing high quantity of data in a snap, giving you a quick view on what you could find inside your transcriptome/sequences' list.
Profile hidden Markov model (HMM) to identify the Kunitz domain in protein sequences, using MSA-guided training and optimization.
👐 TADOSS: TAndem DOmain Swap Stability predictor
THIS PROJECT IS NO LONGER SUPPORTED See Brivez Instead!! https://github.com/furacca/brivez/ - ------------------------------------------ - Cuterle is a bioinformatic tool which return an output file containing every domain annotated by InterProScan via Pfam or SMART analysis from the list of protein submitted.
dom2vec: Protein domain embeddings
Snakemake pipeline for searching genomic sequences for those that encode proteins containing domains of choice
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