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single-cell-transcriptomics

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earmingol / scCellFie

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scCellFie, inspired by the MATLAB-based CellFie tool, offers advanced analysis of metabolic functions on Python using single-cell and spatial transcriptomics. Efficient and user-friendly, it integrates with Scanpy to extend CellFie's capabilities, enabling in-depth single-cell and spatial metabolic task analysis.

systems-biology metabolism single-cell metabolic-pathways spatial-transcriptomics single-cell-transcriptomics metabolic-modeling
  • Updated Oct 21, 2024
  • Python

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