Python Package for the downstream analysis of mass-spectrometry-based proteomics data
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Dec 23, 2024 - Jupyter Notebook
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spectronaut
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This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to provide contaminant protein FASTA and spectral libraries that can be universally applied to DDA and DIA proteomics and freely accessible for the proteomics community.
fasta proteomics dia dda metabolomics mass-spectrometry contamination mitochondrion neurodegeneration dia-nn lysosome keratin spectronaut trypsin streptavidin bioanalytical-chemistry protein-contaminant
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Nov 24, 2024
A Python script to convert the spectral library in BLIB format (.blib) from either Skyline or BiblioSpec to readable library format (OpenSwath or Spectronaut libraries)
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Sep 23, 2023 - Python
Generate a spectral library for Spectronaut from MS Annika results.
python fragments library spectral proteomics mass-spectrometry spectrometry mass cross-linking ms2 spectral-library fragment-ions crosslinking spectronaut xlms crosslinker tandem-ms
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Dec 19, 2024 - Python
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