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Computational Systems and Synthetic Biology, UCL

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  1. AutoCD AutoCD Public

    Forked from behzadk/AutoCD

    Automated synthetic microbial Community Design

    C++ 13 2

  2. ROCC ROCC Public

    ROCC: Reinforcement learning for the Optimisation of Co-Cultures

    Python 11 2

  3. flopr flopr Public

    An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader data, and removing debris and doublets and calibration of flow …

    R 9 6

  4. MIMIC MIMIC Public

    Modelling and Inference of MICrobiomes Project (MIMIC) is a Python package dedicated to simulate, model, and predict microbial communities interactions

    Python 6

  5. cneta cneta Public

    Copy Number Evolutionary Tree Analysis

    C++ 5

  6. wavelength2colour wavelength2colour Public

    Convert a numeric wavelength to an RGB or Hex colour

    R 2

Repositories

Showing 10 of 22 repositories
  • MIMIC Public

    Modelling and Inference of MICrobiomes Project (MIMIC) is a Python package dedicated to simulate, model, and predict microbial communities interactions

    ucl-cssb/MIMIC’s past year of commit activity
    Python 6 MIT 0 15 0 Updated Nov 12, 2024
  • CIN_SV Public
    ucl-cssb/CIN_SV’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 12, 2024
  • ucl-cssb.github.io Public
    ucl-cssb/ucl-cssb.github.io’s past year of commit activity
    CSS 0 0 0 0 Updated Sep 11, 2024
  • cneta Public

    Copy Number Evolutionary Tree Analysis

    ucl-cssb/cneta’s past year of commit activity
    C++ 5 GPL-3.0 0 1 0 Updated Apr 25, 2024
  • flopr Public

    An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader data, and removing debris and doublets and calibration of flow cytometry data.

    ucl-cssb/flopr’s past year of commit activity
    R 9 GPL-3.0 6 0 0 Updated Dec 19, 2023
  • colony-com Public Forked from luca-rosa/rd-model

    Diffusion model of a system where sender strains produce AHL in the presence of arabinose. AHL diffuses and activates GFP production in receiver strains

    ucl-cssb/colony-com’s past year of commit activity
    Python 0 MIT 7 0 0 Updated Nov 2, 2023
  • DODL Public Forked from zcqsntr/DODL

    DODL: digital optimisation of diffusible logic

    ucl-cssb/DODL’s past year of commit activity
    Python 0 1 0 0 Updated Apr 5, 2023
  • worm_neural_nets Public Forked from zcqsntr/worm_neural_nets
    ucl-cssb/worm_neural_nets’s past year of commit activity
    Python 0 1 0 0 Updated Feb 1, 2023
  • Spatial-Computing Public Forked from EnboLyu/Spatial-Computing
    ucl-cssb/Spatial-Computing’s past year of commit activity
    Python 0 1 0 0 Updated Sep 20, 2022
  • RED Public Forked from zcqsntr/RED

    Reinforcment learning for Experimental Design

    ucl-cssb/RED’s past year of commit activity
    Python 2 MIT 6 0 0 Updated Apr 6, 2022
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