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feat: adding 50bp filter for REF/ALT on clinvar-sv import (#293) #294

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@holtgrewe holtgrewe linked an issue Nov 16, 2023 that may be closed by this pull request
@holtgrewe holtgrewe enabled auto-merge (squash) November 16, 2023 07:57
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codecov bot commented Nov 16, 2023

Codecov Report

Attention: 2 lines in your changes are missing coverage. Please review.

Comparison is base (1837899) 71.79% compared to head (5a5ae95) 71.78%.

Files Patch % Lines
src/clinvar_sv/cli/import.rs 66.66% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #294      +/-   ##
==========================================
- Coverage   71.79%   71.78%   -0.01%     
==========================================
  Files          63       63              
  Lines        6115     6121       +6     
==========================================
+ Hits         4390     4394       +4     
- Misses       1725     1727       +2     

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@holtgrewe holtgrewe merged commit 831830a into main Nov 16, 2023
7 of 9 checks passed
@holtgrewe holtgrewe deleted the 293-implement-50bp-threshold-for-clinvar-seqvars-in-sv-import branch November 16, 2023 08:07
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Implement 50bp threshold for ClinVar seqvars in SV import
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