perf: cache mappers, avoid allocations, codons are arrays #172
Codecov / codecov/project
failed
Jun 10, 2024 in 0s
86.34% (-1.09%) compared to bd2b05e
View this Pull Request on Codecov
86.34% (-1.09%) compared to bd2b05e
Details
Codecov Report
Attention: Patch coverage is 87.71930% with 14 lines in your changes missing coverage. Please review.
Project coverage is 86.34%. Comparing base (
bd2b05e) to head (aae3cbb).
Report is 1 commits behind head on main.
Additional details and impacted files
@@ Coverage Diff @@
## main #172 +/- ##
==========================================
- Coverage 87.42% 86.34% -1.09%
==========================================
Files 18 18
Lines 7705 7145 -560
==========================================
- Hits 6736 6169 -567
- Misses 969 976 +7 | Files | Coverage Δ | |
|---|---|---|
| src/data/cdot/json.rs | 89.59% <100.00%> (ø) |
|
| src/mapper/altseq.rs | 93.58% <100.00%> (+0.04%) |
⬆️ |
| src/mapper/cigar.rs | 96.69% <ø> (ø) |
|
| src/mapper/variant.rs | 91.48% <100.00%> (+0.53%) |
⬆️ |
| src/normalizer.rs | 70.73% <ø> (ø) |
|
| src/sequences.rs | 94.86% <75.00%> (-3.43%) |
⬇️ |
| src/mapper/alignment.rs | 90.32% <75.00%> (-0.24%) |
⬇️ |
| src/data/uta.rs | 89.48% <85.71%> (-2.53%) |
⬇️ |
Loading