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fix: add biotype vaultRNA_primary_transcript #180

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Jun 28, 2024
Merged

fix: add biotype vaultRNA_primary_transcript #180

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2 changes: 2 additions & 0 deletions src/data/cdot/json.rs
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Original file line number Diff line number Diff line change
Expand Up @@ -446,6 +446,8 @@
UnprocessedPseudogene,
#[serde(rename = "vault_RNA")]
VaultRna,
#[serde(rename = "vaultRNA_primary_transcript")]
VaultRnaPrimaryTranscript,
#[serde(rename = "V_segment")]
VSegment,
#[serde(rename = "V_gene_segment")]
Expand Down Expand Up @@ -851,11 +853,11 @@
cigar: exon.cigar.clone(),
tx_aseq: None,
alt_aseq: None,
tx_exon_set_id: std::i32::MAX,

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usage of a legacy numeric constant 

warning: usage of a legacy numeric constant
   --> src/data/cdot/json.rs:856:37
    |
856 |                     tx_exon_set_id: std::i32::MAX,
    |                                     ^^^^^^^^^^^^^
    |
    = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#legacy_numeric_constants
    = note: `#[warn(clippy::legacy_numeric_constants)]` on by default
help: use the associated constant instead
    |
856 |                     tx_exon_set_id: i32::MAX,
    |                                     ~~~~~~~~
alt_exon_set_id: std::i32::MAX,

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usage of a legacy numeric constant 

warning: usage of a legacy numeric constant
   --> src/data/cdot/json.rs:857:38
    |
857 |                     alt_exon_set_id: std::i32::MAX,
    |                                      ^^^^^^^^^^^^^
    |
    = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#legacy_numeric_constants
help: use the associated constant instead
    |
857 |                     alt_exon_set_id: i32::MAX,
    |                                      ~~~~~~~~
tx_exon_id: std::i32::MAX,

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usage of a legacy numeric constant 

warning: usage of a legacy numeric constant
   --> src/data/cdot/json.rs:858:33
    |
858 |                     tx_exon_id: std::i32::MAX,
    |                                 ^^^^^^^^^^^^^
    |
    = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#legacy_numeric_constants
help: use the associated constant instead
    |
858 |                     tx_exon_id: i32::MAX,
    |                                 ~~~~~~~~
alt_exon_id: std::i32::MAX,

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usage of a legacy numeric constant 

warning: usage of a legacy numeric constant
   --> src/data/cdot/json.rs:859:34
    |
859 |                     alt_exon_id: std::i32::MAX,
    |                                  ^^^^^^^^^^^^^
    |
    = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#legacy_numeric_constants
help: use the associated constant instead
    |
859 |                     alt_exon_id: i32::MAX,
    |                                  ~~~~~~~~
exon_aln_id: std::i32::MAX,

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usage of a legacy numeric constant 

warning: usage of a legacy numeric constant
   --> src/data/cdot/json.rs:860:34
    |
860 |                     exon_aln_id: std::i32::MAX,
    |                                  ^^^^^^^^^^^^^
    |
    = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#legacy_numeric_constants
help: use the associated constant instead
    |
860 |                     exon_aln_id: i32::MAX,
    |                                  ~~~~~~~~
})
.collect())
} else {
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