shrug

varfish-org · Aug 7, 2024 · 1cf57b7 · 1cf57b7
1 parent 2968d86
commit 1cf57b7
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Showing 2 changed files with 6 additions and 6 deletions.
diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
@@ -15,7 +15,7 @@ defaults:
 
 env:
   MEHARI_VERSION: "0.26.1"
-  SNAKEMAKE_OUTPUT_CACHE: "~/mehari-data-tx/cache"
+  SNAKEMAKE_OUTPUT_CACHE: "/github/workspace/snakemake_cache"
 
 jobs:
   build_data_release:
@@ -46,7 +46,7 @@ jobs:
         id: cache-snakemake
         uses: actions/cache@v4
         with:
-          path: ${{ env.SNAKEMAKE_OUTPUT_CACHE }}
+          path: /github/workspace/snakemake_cache
           key: ${{ matrix.genome_release }}-${{ matrix.source }}
 
       - name: Run data build workflow
@@ -55,7 +55,7 @@ jobs:
           directory: mehari-data-tx
           snakefile: workflow/Snakefile
           stagein: |
-            mkdir -p ${{ env.SNAKEMAKE_OUTPUT_CACHE }}
+            mkdir -p /github/workspace/snakemake_cache
           args: "--configfile config/config.yaml --sdm conda --show-failed-logs --cores 4 --jobs 4 --conda-cleanup-pkgs cache results/${{ matrix.genome_release }}-${{ matrix.source }}/mehari/seqrepo/report/mehari_db_check.txt"
           show-disk-usage-on-error: true
 

diff --git a/.github/workflows/release-please.yml b/.github/workflows/release-please.yml
@@ -12,7 +12,7 @@ defaults:
 
 env:
   MEHARI_VERSION: "0.26.1"
-  SNAKEMAKE_OUTPUT_CACHE: "~/mehari-data-tx/cache"
+  SNAKEMAKE_OUTPUT_CACHE: "/github/workspace/snakemake_cache"
 
 jobs:
   release-please:
@@ -66,7 +66,7 @@ jobs:
         id: cache-snakemake
         uses: actions/cache@v4
         with:
-          path: ${{ env.SNAKEMAKE_OUTPUT_CACHE }}
+          path: /github/workspace/snakemake_cache
           key: ${{ matrix.genome_release }}-${{ matrix.source }}
 
       - name: Run data build workflow
@@ -76,7 +76,7 @@ jobs:
           directory: mehari-data-tx
           snakefile: workflow/Snakefile
           stagein: |
-            mkdir -p ${{ env.SNAKEMAKE_OUTPUT_CACHE }}
+            mkdir -p /github/workspace/snakemake_cache
           args: "--configfile config/config.yaml --sdm conda --show-failed-logs --cores 4 --jobs 4 --conda-cleanup-pkgs cache results/${{ matrix.genome_release }}-${{ matrix.source }}/mehari/seqrepo/report/mehari_db_check.txt"
           show-disk-usage-on-error: true