v0.1.3

PETSc v0.1.3

Closed issues:

• Move to JuliaParallel (#1)
• Use Symbols for Petsc String Literals (#2)
• Use Regular Petsc Initialize (#3)
• Add Mat/Vec Format as Type Paramater (#4)
• PetscIgnoreErrorHandler needs to be in init (#5)
• wrap multiple PETSc libraries (float, double, complex, ...) (#6)
• convert shell scripts to julia build.jl (#7)
• remove tmp and test files from git (#8)
• don't use --lines (#10)
• Enable testing on OSX (#11)
• Fix deprecations (#12)
• 4-space indentation (#14)
• Reuse OpenBLAS installation from Julia distribution (#16)
• finalizers commented out? (#21)
• Test failure on OS X (#29)
• missing one(::Mat) (#47)
• switch to TestNext (#49)
• rand, sprand? (#51)
• PETSc.PetscError(63,"Argument out of range") (#52)
• Additional PETSc build options (#55)
• Local or Global Sizing (#56)
• Manual (#57)
• Missing MatShellGetContext (#58)
• Type Unstable Constructors (#59)
• TS? (#60)
• Add support for nompi version (#67)
• Make it optional to use RealSingle and ComplexDouble versions of PETSc (#68)
• rename KSPSolveTranspose! to Base.LinAlg.At_ldiv_B! (#70)
• Memory Problem? (#71)
• no need for @doc (#74)
• don't call deepcopy in LocalArray (#75)
• LocalArray should be a DenseArray subtype (#76)
• merge LocalArray and LocalArrayRead, rename to LocalVector (#77)
• Generalize Distributed Array Interface (#79)
• Weird method overwritten warning on 0.5 (#87)
• Keyword options not passed when calling KSP (#88)
• Empty buildopts.conf file (#90)
• Finalize MPI in petsc_com.jl (#91)
• LoadError: LoadError: at row 0, column 0 : ArgumentError("number of rows in dims must be > 0, got 0") (#93)
• Beginner Question: Using Ubuntu 18.04 and julia 1.0.3 within visual studio (#96)
• Update (#98)
• Set up documenter (#100)
• Wrap SNES (#101)
• problems installing (#108)
• example not working (#109)
• PETSc.jl with system petsc? (#111)
• Why protect finalize with comm == MPI.COMM_SELF? (#114)
• maintainer / owner? (#116)
• Register PETSc.jl as a Julia package (#131)
• error during test (#135)
• PETSc options treatment (#144)
• more types? (#145)
• TagBot trigger issue (#159)
• test PETSc fails (#164)

Merged pull requests:

• Add banner to README (#13) (@andreasnoack)
• Clean up Travis configuration (#15) (@jiahao)
• Clean up build configuration (#17) (@jiahao)
• require julia 0.4, not 0.4- (#18) (@stevengj)
• pure-Julia build script (#19) (@stevengj)
• openmpi compatibility via JuliaParallel/MPI.jl#89 (#20) (@stevengj)
• Cleanup (#22) (@stevengj)
• rename setsizes! to Base.resize! (#23) (@stevengj)
• add Vec(::Vector) constructor (#24) (@stevengj)
• cleanup and expand IS functions (#25) (@stevengj)
• remove .comm fields in favor of a comm(x) method that calls PetscObjectComm (#26) (@stevengj)
• use 2-space indentation uniformly (#27) (@stevengj)
• KSP cleanup (#28) (@stevengj)
• More tests for Mat (#30) (@kshyatt)
• Fix bugs and add tests for vec (#31) (@kshyatt)
• Remove use of deprecated FactCheck syntax (#32) (@jakebolewski)
• Simplify PETSc initialization (#33) (@jakebolewski)
• Remove finalization error for VecScatter finalizer (#34) (@jakebolewski)
• Even more Mat tests (#35) (@kshyatt)
• Fix bug and add tests for Vec (#36) (@kshyatt)
• Added many more matrix functions (#37) (@kshyatt)
• Added test for chk (#38) (@kshyatt)
• Fix bug in transpose and add trace (#39) (@kshyatt)
• Added petscviews for KSP and PC, added BCGS test for KSP (#40) (@kshyatt)
• Bug fix and more tests (#41) (@kshyatt)
• [RFC] OSX build for Travis (#42) (@kshyatt)
• Added tests for PC (#43) (@kshyatt)
• More tests for options (#44) (@kshyatt)
• Prevent Travis OpenMPI build timeout (#45) (@kshyatt)
• Import scale and scale! correctly (#48) (@kshyatt)
• Fix trace var name and remove Base tag (#50) (@kshyatt)
• Stop using FactCheck (#53) (@kshyatt)
• minor test cleanups (#54) (@stevengj)
• Fix PetscDestroy for TS and add test (#62) (@kshyatt)
• Looser requirements for abs(::Complex64) (#63) (@kshyatt)
• More mini-tests (#64) (@kshyatt)
• Added method to get KSP object of TS (#65) (@kshyatt)
• Added some docs for TS's options (#66) (@kshyatt)
• Build system (#69) (@JaredCrean2)
• make index assembling change (#72) (@JaredCrean2)
• Implement Map for Vectors (#73) (@JaredCrean2)
• remove @doc, closes #74 (#78) (@JaredCrean2)
• [WIP] switch LocalArray to DenseArray subtype (#80) (@JaredCrean2)
• More indexing on Vectors (#81) (@JaredCrean2)
• More indexing2 (#82) (@JaredCrean2)
• Constructors2 (#83) (@JaredCrean2)
• add capability to access individual rows of sparse matrix (#84) (@JaredCrean2)
• [wip] Kron (#85) (@JaredCrean2)
• Matformat (#86) (@JaredCrean2)
• Install TagBot as a GitHub Action (#97) (@JuliaTagBot)
• Revamp using new PETSc_jll binaries (#99) (@simonbyrne)
• Delete REQUIRE (#103) (@musm)
• start on SNES (#104) (@simonbyrne)
• small cleanup: add docs, read/write options (#105) (@simonbyrne)
• fix PC refcounting (#106) (@simonbyrne)
• Minor typo fix in lib.jl (#107) (@amartinhuertas)
• Adding SNES examples (#110) (@boriskaus)
• Remove stale code and update README (#112) (@jkozdon)
• Options should be checked with === (#115) (@jkozdon)
• Allow for custom PETSc library builds (#117) (@jkozdon)
• Adding DMStag functions as well as testing and documentation (#119) (@nicoberlie)
• DM and DMDA interface (#120) (@jkozdon)
• Update the way multiple PETSc versions are dispatched (#121) (@jkozdon)
• Update init.jl to use @for_petsc macro and dispatch based on library type (not PetscScalar) (#122) (@jkozdon)
• Add .JuliaFormatter.toml (#123) (@jkozdon)
• Update viewer.jl to use @for_petsc macro (#124) (@jkozdon)
• remove unneeded finalize function (#125) (@jkozdon)
• Update options.jl to use @for_petsc macro (#126) (@jkozdon)
• Documentation setup (#127) (@boriskaus)
• Create documentation.yml (#128) (@boriskaus)
• Update documentation.yml (#129) (@boriskaus)
• Update README.md (#130) (@boriskaus)
• Use petsc function to get mpi communicator (#132) (@jkozdon)
• Revert #132 (#133) (@jkozdon)
• Add a petsc docs link function (#134) (@jkozdon)
• Rely on PETSc duplicated comms (#136) (@jkozdon)
• Do not assume julia launch command (#138) (@jkozdon)
• Fix converts to prevent garbage collection (#140) (@jkozdon)
• Fix hang on view with MPI (#141) (@jkozdon)
• Switch to using multiple libraries from PETSc_jll (#142) (@jkozdon)
• Add Windows CI again (#148) (@simonbyrne)
• Docs: fix typo: "pre-build" --> "pre-built" (#152) (@psanan)
• Add Compat for MPI (#153) (@jkozdon)
• Bjpk/fixes dmstag (#154) (@boriskaus)
• DMSTAG_Stokes_2D.jl: fix typos in leading comments (#156) (@psanan)
• Move SNES setfromoptions to with options block (#157) (@jkozdon)
• Update README following package registration (#160) (@jkozdon)
• Change a few master -> main (#162) (@jkozdon)
• Fix docs now package is registered (#163) (@jkozdon)
• Ignore startup.jl file of user in tests (#165) (@vchuravy)