yeast 8.1.2 #128
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yeast 8.1.2 #128
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corrected links + added contributor
date + model size is now updated when using saveYeastModel.m
to avoid eventual conflicts between master and devel (review of PR might take more a day or more)
Feat/improvedReadme
add database new gene annotation files
Add new GPR relations for existing reactions
no content changes
* geneName = geneID when geneName in SGD DB has no match or is empty * should be "COBRAProtein"
change column title for the DBNewGeneAnnotation
Saving function will error if the model is not SBML compliant
YAR0723W , YIL168W and YIL167W are not functional
delete three non functional genes and changed the related GPR rules
Delete unsed 3 genes using cobra function:model = removeUnusedGenes(model)
feat: check SBML validity
* model.modelID: short name * model.modelName: full name
version is now stored in id, not metaid.
fix-rxn-prop:addNewGPRrelations
BenjaSanchez
added
the
new release
Feat/modelParams
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note: |
hongzhonglu
approved these changes
Jun 27, 2018
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saveYeastModel.mnow checks if the model is a valid SBML structure; if it isn't it will error (PR feat: check SBML validity #126).README.mdupdates automatically when saving the model (PR Feat/improvedReadme #123).modelNameandmodelID; the latter which will now store the version number (PR Feat/modelParams #127).README.md(PR Feat/improvedReadme #123).