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Install script and pip packages via sage-spkg #29386

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mkoeppe opened this issue Mar 21, 2020 · 35 comments · Fixed by #36747
Closed

Install script and pip packages via sage-spkg #29386

mkoeppe opened this issue Mar 21, 2020 · 35 comments · Fixed by #36747
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c: build p: major / 3 t: enhancement
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sage-10.3

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mkoeppe commented Mar 21, 2020

Follow-up from #29287.

Script packages are installed by special rules in build/make/Makefile.

This ticket installs them by sage-spkg instead. This enables script packages to participate in the staged installs (SAGE_DESTDIR) and uninstallation mechanisms.

This is useful for #29387 to clean up #27870/#29003/#29082, which introduced files in SAGE_LOCAL that do not belong to any package and are never uninstalled.

We also make the decision whether spkg-install is generated from a template spkg-install.in or provided as is in the source tree orthogonal to the distinction source=script vs. source=pip.
We simply generate spkg-install if spkg-install.in is present.

Ideally, when done, changing a package's source between script and normal and pip will no longer require running bootstrap.

CC: @dimpase @jhpalmieri @embray @orlitzky

Component: build

Work Issues: Move "dummy script package" code to sage-spkg

Author: Matthias Koeppe

Branch/Commit: u/mkoeppe/install_script_packages_via_sage_spkg @ 7a25d1d

Issue created by migration from https://trac.sagemath.org/ticket/29386
@mkoeppe mkoeppe added this to the sage-9.1 milestone Mar 21, 2020
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mkoeppe commented Apr 14, 2020

comment:1

pushing these forward to 9.2

@mkoeppe mkoeppe modified the milestones: sage-9.1, sage-9.2 Apr 14, 2020
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mkoeppe commented Jun 4, 2020

Dependencies: #29793

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@mkoeppe mkoeppe modified the milestones: sage-9.2, sage-9.3 Aug 13, 2020
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embray commented Sep 2, 2020

comment:6

+1 this would be a very nice improvement.

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mkoeppe commented Sep 24, 2020

Branch: u/mkoeppe/install_script_packages_via_sage_spkg

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mkoeppe commented Sep 24, 2020

Changed dependencies from #29793 to #29793, #30657

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mkoeppe commented Sep 24, 2020

Commit: fee5bc2

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mkoeppe commented Sep 24, 2020

New commits:

f0f03c9build/bin/sage-spkg: Remove dead code for manufacturing an spkg-install script
46e5f68build/bin/sage-spkg: Get rid of USE_LOCAL_SCRIPTS (it was always yes); prepare for script packages
fee5bc2build/bin/sage-spkg: For script packages, do not poison the proxy variables

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sagetrac-git mannequin commented Sep 24, 2020

Changed commit from fee5bc2 to e4c27f6

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sagetrac-git mannequin commented Sep 24, 2020

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

9ee2110build/bin/sage-dist-helpers: Also use $sudo for storing the wheel file
d7aac84src/doc/en/developer/packaging.rst: Update sdh_... documentation
9b7c7a0build/bin/sage-pip-{install,uninstall}: Fix typo in comment
4135e8bbuild/bin/sage-pip-install: Remove an outdated comment
f2e7075Merge tag '9.2.beta13' into t/29500/install_all_python_packages_via_pip_wheel__create_pep_503_simple_repository_for_wheels
bd0fd2fMerge branch 't/29500/install_all_python_packages_via_pip_wheel__create_pep_503_simple_repository_for_wheels' into t/30657/fix_up__sage__p_
2e20f23build/bin/sage-spkg: Move SAGE_SPKG_{INST,SCRIPTS,WHEELS} setting here from build/bin/install, make them relative to SAGE_INST_LOCAL
ac09b14Merge branch 't/30657/fix_up__sage__p_' into t/29386/install_script_packages_via_sage_spkg
bf0c3dcbuild/bin/sage-spkg: Exit with error for some old-style script invocations
e4c27f6build/bin/sage-spkg: Remove error message when checksums.ini does not exist (script package)

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sagetrac-git mannequin commented Sep 24, 2020

Branch pushed to git repo; I updated commit sha1. New commits:

3ceeaa7build/bin/sage-spkg: Fix up for normal and script packages
8c4fb4dbuild/bin/sage-spkg: Handle script packages without package-version.txt
137365abuild/make/Makefile.in: Replace 'SPKG-clean' by 'SPKG-uninstall', with deprecation
a9cbfdabuild/make/Makefile.in: Install script packages using sage-spkg
81a63dfsrc/bin/sage: Use 'make SPKG-uninstall' instead of -clean

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sagetrac-git mannequin commented Sep 24, 2020

Changed commit from e4c27f6 to 81a63df

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sagetrac-git mannequin commented Sep 24, 2020

Branch pushed to git repo; I updated commit sha1. New commits:

3d6fa59build/make/Makefile.in: Replace 'SPKG-clean' by 'SPKG-uninstall', with deprecation, for pip packages too

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sagetrac-git mannequin commented Sep 24, 2020

Changed commit from 81a63df to 3d6fa59

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mkoeppe commented Sep 24, 2020

Author: Matthias Koeppe

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sagetrac-git mannequin commented Sep 25, 2020

Changed commit from 3d6fa59 to ae5ea98

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sagetrac-git mannequin commented Sep 25, 2020

Branch pushed to git repo; I updated commit sha1. New commits:

ae5ea98build/make/Makefile.in: Make SPKG-uninstall targets phony

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sagetrac-git mannequin commented Sep 25, 2020

Branch pushed to git repo; I updated commit sha1. New commits:

47ef805WIP: Install pip packages with sage-spkg
6c27c05build/make/Makefile.in: Another SPKG-clean -> SPKG-uninstall

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sagetrac-git mannequin commented Sep 25, 2020

Changed commit from ae5ea98 to 6c27c05

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sagetrac-git mannequin commented Oct 2, 2020

Changed commit from 6c27c05 to 660d689

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sagetrac-git mannequin commented Oct 2, 2020

Branch pushed to git repo; I updated commit sha1. New commits:

9750195WIP: Install pip packages with sage-spkg
be2417cMerge tag '9.2.beta14' into t/30657/fix_up__sage__p_
8ee7ee2build/make/install: Set SAGE_SPKG_WHEELS also here so that script packages still work
72c5901Merge branch 't/30657/fix_up__sage__p_' into t/29386/install_script_packages_via_sage_spkg
660d689Revert "build/make/install: Set SAGE_SPKG_WHEELS also here so that script packages still work"

@mkoeppe mkoeppe added this to the sage-9.6 milestone Dec 14, 2021
@mkoeppe mkoeppe modified the milestones: sage-9.6, sage-9.7 Mar 5, 2022
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sagetrac-git mannequin commented Jul 21, 2022

Changed commit from 660d689 to 7a25d1d

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sagetrac-git mannequin commented Jul 21, 2022

Branch pushed to git repo; I updated commit sha1. This was a forced push. New commits:

483b65ebuild/bin/sage-spkg: Remove dead code for manufacturing an spkg-install script
445ed7ebuild/bin/sage-spkg: Get rid of USE_LOCAL_SCRIPTS (it was always yes); prepare for script packages
74f549cbuild/bin/sage-spkg: For script packages, do not poison the proxy variables
20ddd7ebuild/bin/sage-spkg: Exit with error for some old-style script invocations
25d38e9build/bin/sage-spkg: Remove error message when checksums.ini does not exist (script package)
97c61bebuild/bin/sage-spkg: Fix up for normal and script packages
1b1401dbuild/bin/sage-spkg: Handle script packages without package-version.txt
d850e60build/make/Makefile.in: Install script packages using sage-spkg
7a25d1dWIP: Install pip packages with sage-spkg

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mkoeppe commented Jul 21, 2022

Changed work issues from rework on top of #29013 to none

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mkoeppe commented Jul 21, 2022

Changed dependencies from #29013 to none

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mkoeppe commented Jul 21, 2022

comment:25

Rebased and dropped all clean/uninstall changes here because that is #29097

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mkoeppe commented Jul 21, 2022

Work Issues: Move "dummy script package" code to sage-spkg

@mkoeppe mkoeppe modified the milestones: sage-9.7, sage-9.8 Jul 21, 2022
@mkoeppe mkoeppe changed the title Install script packages via sage-spkg Install script and pip packages via sage-spkg Aug 12, 2022
@mkoeppe mkoeppe modified the milestones: sage-9.8, sage-9.9 Dec 31, 2022
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@orlitzky orlitzky mentioned this issue Jan 9, 2022
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@mkoeppe mkoeppe removed this from the sage-10.0 milestone Apr 30, 2023
@mkoeppe mkoeppe mentioned this issue Nov 22, 2023
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@vbraun vbraun closed this as completed in 6cadd84 Dec 14, 2023
@mkoeppe mkoeppe added this to the sage-10.3 milestone Dec 14, 2023
@mkoeppe mkoeppe mentioned this issue Dec 16, 2023
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vbraun pushed a commit to vbraun/sage that referenced this issue Dec 17, 2023
sagemathgh-36900: Fix build of optional Cython modules broken in sage…
73e52a4 
…math#29386

The Cython modules depending on optional packages (such as
sage.libs.coxeter3) were not being built after sagemath#29386. This showed up in
the CI as numerous doctest failures; as reported in
sagemath#36775 (comment)

Fixed here by avoiding a clash of environment variables that prevented
the function `is_package_installed_and_updated` from functioning during
the build of sagelib.

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URL: sagemath#36900
Reported by: Matthias Köppe
Reviewer(s): Dima Pasechnik
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build/bin/sage-spkg: Add support for installing script packages mkoeppe/sage
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