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Pycharm tidies #161

Merged
merged 20 commits into from
Nov 14, 2023
Merged

Pycharm tidies #161

merged 20 commits into from
Nov 14, 2023

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cmbant
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@cmbant cmbant commented Nov 13, 2023

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Codecov Report

Merging #161 (c691e32) into dev-moreflake8reqs (91948d2) will decrease coverage by 0.06%.
Report is 4 commits behind head on dev-moreflake8reqs.
The diff coverage is 75.00%.

Additional details and impacted files

Impacted file tree graph

@@                  Coverage Diff                   @@
##           dev-moreflake8reqs     #161      +/-   ##
======================================================
- Coverage               74.53%   74.47%   -0.06%     
======================================================
  Files                      33       33              
  Lines                    2022     2018       -4     
======================================================
- Hits                     1507     1503       -4     
  Misses                    515      515              
Files Coverage Δ
soliket/__init__.py 100.00% <100.00%> (ø)
soliket/bandpass.py 91.26% <100.00%> (ø)
soliket/bias.py 100.00% <100.00%> (ø)
soliket/cash.py 100.00% <100.00%> (ø)
soliket/cash_data.py 90.47% <100.00%> (-0.44%) ⬇️
soliket/ccl.py 93.84% <100.00%> (+0.29%) ⬆️
soliket/clusters/survey.py 53.22% <100.00%> (ø)
soliket/clusters/sz_utils.py 86.50% <100.00%> (ø)
soliket/constants.py 100.00% <100.00%> (ø)
soliket/cosmopower.py 16.90% <100.00%> (-0.59%) ⬇️
... and 11 more

@cmbant cmbant changed the base branch from dev-moreflake8reqs to master November 14, 2023 12:31
@itrharrison itrharrison merged commit 2d0211f into master Nov 14, 2023
6 checks passed
@itrharrison itrharrison deleted the tidy branch November 14, 2023 16:01
itrharrison added a commit that referenced this pull request Jun 7, 2024
* pyccl optional (#153)

* pyccl optional

* oops

* Add simple halo model (#150)

* remove depracated likelihood.theory calls

* codestyle

* sphinx compatability update

* sphinx compatability update 2204

* add build tools

* move rtd python ver

* rtd try different pyver

* rtd try different order

* conda on rtd

* update rtd mock import

* add rtd theme

* add rtd theme correctly

* add rtd theme in setup.cfg

* Testing yaml instead of yml.

* added docs conda env

* add full requirements in docs

* pin tensorflow dep

* started basic halo model

* started basic pyhm implementation and tests

* pkmm computation with z loop

* remove empty functions

* test against precomputed value

* codestyle and fix test

* add missing default files

* added docs

* line length

* remove refernce to bias model in docs

* improve docs

---------

Co-authored-by: Hidde Jense <JenseH@cardiff.ac.uk>

* Deprecations update (#155)

* pyccl optional

* oops

* remove pkg_resources

* str path

* pudate latest

* fix

* py311

* py311

* py311

* typo

* Update docs/soliket-docs.yml

* Update soliket-tests.yml

---------

Co-authored-by: Ian Harrison <itrharrison@gmail.com>

* Pycharm tidies (#161)

* pyccl optional

* oops

* remove pkg_resources

* str path

* added new warnings, fails

* pudate latest

* changes for new reqs

* fix

* py311

* py311

* py311

* update halomodel codestyle

* Mist tidy

* typo

* brackets

---------

Co-authored-by: Ian Harrison <itrharrison@gmail.com>

* Run tests only on PR open, review requests (#159)

* run tests only on PR open, review requests

* added some extra instructions in docs

* reorder on setting

* line break

* reset what is written in docs

* Add more flake8 requirements (#157)

* added new warnings, fails

* changes for new reqs

* update halomodel codestyle

* whitespace warnings

* added zstar to crosscorrelation (#165)

* Implementation of the lensing power spectrum computation with CCL (#166)

* Implementing the lensing power spectrum computation with CCL. Added a flag to choose whether to use CAMB or CCL to compute this power spectrum.

* Adding test to check CCL and CAMB agree to predict the CMB lensing power spectrum

---------

Co-authored-by: Raphaël Kou <raphael.kou@apc.in2p3.fr>

* solving bug in mflike (#170)

* Fix readme (#173)

* stricter indentation

* Update README.rst

* Dev check ell range mflike (#171)

* change to lmax requirements

* removing comments in modified files

* solving style issues

* solving issues in test mflike

* solving codestyle issues

* switched from hard-coded to l_bpws-depndt multipole

* fixed codestyle

---------

Co-authored-by: Martina Gerbino <bradamante@martina.local>
Co-authored-by: Ian Harrison <itrharrison@gmail.com>

* Resolving packages path with cobaya tools (#169)

* Fix extra letter in calibration params

* Use cobaya tools to resolve packages path

* flake

* Revert "flake"

This reverts commit 526acde.

* Update yaml files with correct paramnames and paths

For the `test_multi.py`, I switched from `MFLike` to `TestMFLike`, coherently with `test_mflike.py`

* Update paths in test_multi

* Enable multi and mflike in test_runs

* bug fix

* Avoid overwrite global packages_path

* flake

* Change pathfinding to data with packages path

* Revert to request forcing rootdir

* Point to `tox.ini` directory

---------

Co-authored-by: mgerbino <marti.gerbino@gmail.com>
Co-authored-by: Ian Harrison <itrharrison@gmail.com>

---------

Co-authored-by: Antony Lewis <cmbant@users.noreply.github.com>
Co-authored-by: Hidde Jense <JenseH@cardiff.ac.uk>
Co-authored-by: raphkou <61792335+raphkou@users.noreply.github.com>
Co-authored-by: Raphaël Kou <raphael.kou@apc.in2p3.fr>
Co-authored-by: Serena Giardiello <67148348+sgiardie@users.noreply.github.com>
Co-authored-by: mgerbino <marti.gerbino@gmail.com>
Co-authored-by: Martina Gerbino <bradamante@martina.local>
Co-authored-by: Giacomo Galloni <giacomo.galloni@unife.it>
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3 participants