CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
Multidimensional implementation of standard and extended Kalman Filters
Precision-based sampling from state space models that have no measurement error
Compares the signals from different regions of interest (ROIs) to determine which ROIs belong to the same cell. Used for glioblastoma images.
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